Job Description P77562 Confidence 20.83% Date Thu Jan 5 12:30:35 GMT 2012 Rank 25 Aligned Residues 82 % Identity 12% Template c3h4zC_ PDB info PDB header:allergen Chain: C: PDB Molecule:maltose-binding periplasmic protein fused with allergen PDBTitle: crystal structure of an mbp-der p 7 fusion protein Resolution 2.35 Å

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		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		A	V	A	Q	Q	E	S	N	Y	Q	A	D	P	A	V	P	G	L	S	K	.	.	.	I	A	W	Q	E	I	D	R	R	A	E	R	M	H	I	P	A	F	L	V	H	T	A	L	K	I	K	S	P	N	G	K	S	Y	S	E	R	L	D	S	V	R	T	E	K	Q	L	S	A	I	F	D	D	L	I	N	M
Query Conservation																						.	.	.
Alig confidence																						.	.	.																																				.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.
Template Sequence		A	T	M	E	N	A	Q	K	G	E	I	M	P	N	I	P	Q	M	S	A	F	W	Y	A	V	R	T	A	V	I	N	A	A	S	G	R	Q	T	V	D	A	A	L	A	A	A	Q	T	N	A	A	A	D	P	I	H	Y	D	.	.	.	.	.	.	K	I	T	E	E	I	N	K	A	V	D	E	A	V	A	A
Template Known Secondary structure										S						S	T	T																		S	S	S													T	T	S							.	.	.	.	.	.
Template Predicted Secondary structure																																																												.	.	.	.	.	.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.							.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	M	G	Q	T	L	F	G	S	L	N	P	V	R
Query Conservation
Alig confidence						.	.	.	.
Template Conservation						.	.	.	.
Template Sequence		I	E	K	S	.	.	.	.	E	T	F	D	P	M	K
Template Known Secondary structure					S	.	.	.	.	S	S	S	S	S
Template Predicted Secondary structure						.	.	.	.
Template SS confidence
		1040	.	.	.					.	.	.	.	.	.	1050

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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