Job Description P0A9M8 Confidence 100.00% Date Thu Jan 5 11:10:45 GMT 2012 Rank 8 Aligned Residues 287 % Identity 15% Template d1vi1a_ SCOP info Isocitrate/Isopropylmalate dehydrogenase-like Isocitrate/Isopropylmalate dehydrogenase-like PlsX-like Resolution 2.95

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		406	.	.	.		410	.	.	.	.					.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure						.						.	.	.	.
Query SS confidence						.						.	.	.	.
Query Sequence		R	I	V	L	.	P	E	G	D	E	.	.	.	.	P	R	T	V	K	A	A	A	I	C	A	E	R	G	I	A	T	C	V	L	L	G	N	P	A	E	I	N	R	V	A	A	S	Q	G	V	E	L	G	A	G	I	E	I	V	D	P	E	V	V	R	E	S	Y	V	G	R	L	V	E	L	R	K	N	K	G
Query Conservation						.						.	.	.	.
Alig confidence						.						.	.	.	.																																				.	.	.	.
Template Conservation																																																			.	.	.	.
Template Sequence		R	I	A	V	D	A	X	G	G	D	H	A	P	K	A	V	I	D	G	V	I	K	G	I	E	A	F	D	D	L	H	I	T	L	V	G	D	K	T	T	I	E	S	H	L	T	T	T	S	.	.	.	.	D	R	I	T	V	L	H	A	D	E	V	I	E	P	T	D	E	P	V	R	A	V	R	R	K	K	N
Template Known Secondary structure							S	S		S	S	S	T	T															T	T														T	T			S			.	.	.	.	T	T								B				T	T	S										T	T
Template Predicted Secondary structure																																																			.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.		.	.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		M	T	E	T	V	A	R	E	Q	L	E	D	N	V	V	L	G	T	L	M	L	E	Q	D	E	V	D	G	L	V	S	G	A	V	H	T	T	A	N	T	I	R	P	P	L	Q	L	I	K	T	A	P	G	S	S	L	V	S	S	V	F	F	M	L	L	P	E	.	Q	V	Y	V	Y	G	D	C	A	I	N	P
Query Conservation																																																																					.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.																				.	.																																		.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Sequence		S	S	.	.	.	.	.	.	.	.	.	.	.	X	V	L	X	A	Q	E	V	A	E	N	R	A	D	A	C	I	S	A	.	.	G	N	T	G	A	L	X	T	A	G	L	F	I	V	G	R	I	K	G	I	D	R	P	A	L	A	P	T	L	P	T	V	S	G	D	G	F	L	L	L	D	V	G	A	N	V
Template Known Secondary structure		B		.	.	.	.	.	.	.	.	.	.	.										T	T	S		S						.	.	S												T	T		B		T	T		S	S										S	S	S								S	S	S		S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.																				.	.
Template SS confidence
		78	.												80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.		580	.	.	.		.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620					.	.	.	.	.	.	.	.	.	630	.	.	.
Predicted Secondary structure																						.					.																																						.	.	.	.
Query SS confidence																						.					.																																						.	.	.	.
Query Sequence		D	P	T	A	E	Q	L	A	E	I	A	I	Q	S	A	D	S	A	A	A	.	F	G	I	E	.	P	R	V	A	M	L	S	Y	S	T	G	T	S	G	A	G	S	D	V	E	K	V	R	E	A	T	R	L	A	Q	E	K	R	P	D	L	M	.	.	.	.	I	D	G	P	L	Q	Y	D	A	A	V	M	A
Query Conservation																						.					.																																						.	.	.	.
Alig confidence																						.					.									.	.	.																					.						.	.	.	.
Template Conservation																																				.	.	.																					.
Template Sequence		D	A	K	P	E	H	L	V	Q	Y	A	I	X	G	S	V	Y	S	Q	Q	V	R	G	V	T	S	P	R	V	G	L	L	N	V	.	.	.	G	T	E	D	K	K	G	N	E	L	T	K	Q	T	F	Q	I	L	K	E	.	T	A	N	I	N	F	I	G	N	V	E	A	R	D	L	L	D	D	V	A	D	V
Template Known Secondary structure		S																				T	S			S	S								S	.	.	.	S	S	S	T	T		S													S	.		T	T	S								G	G	G	G	G	G	T	S		S
Template Predicted Secondary structure																																				.	.	.																					.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
							634	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.						.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.
Predicted Secondary structure		.	.	.	.	.																																								.	.	.	.	.
Query SS confidence		.	.	.	.	.																																								.	.	.	.	.
Query Sequence		.	.	.	.	.	D	V	A	K	S	K	A	P	N	S	P	V	A	G	R	A	T	V	F	I	F	P	D	L	N	T	G	N	T	T	Y	K	A	V	Q	R	S	A	D	.	.	.	.	.	L	I	S	I	G	P	M	L	Q	G	M	R	K	P	V	N	D	L	S	R	G	A	L	V	D	D	I	V	Y	T	I
Query Conservation		.	.	.	.	.																																								.	.	.	.	.
Alig confidence		.	.	.	.	.																																								.	.	.	.	.
Template Conservation
Template Sequence		V	V	T	D	G	F	T	G	N	V	T	L	K	T	L	E	G	S	A	L	S	I	F	K	X	X	R	D	V	X	T	S	T	L	V	L	K	P	K	L	K	E	X	K	X	K	X	E	Y	S	N	Y	G	G	A	S	L	F	G	L	K	A	P	V	I	K	A	H	G	S	S	D	S	N	A	V	F	R	A	I
Template Known Secondary structure																																T	T	T																G	G	G	S							T	B	S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		704	.	.	.	.	.	710	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	T	A	I	Q	S	A	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Q	A	R	E	X	V	S	Q	N
Template Known Secondary structure										T	T
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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