Job Description P0A9M8 Confidence 100.00% Date Thu Jan 5 11:10:45 GMT 2012 Rank 9 Aligned Residues 268 % Identity 24% Template d1u7na_ SCOP info Isocitrate/Isopropylmalate dehydrogenase-like Isocitrate/Isopropylmalate dehydrogenase-like PlsX-like Resolution 2.26

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		405	.	.	.	.		410	.	.	.	.				.	.	.	.	.	420	.	.	.	.	.	.	.	.	.		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.						.	.	.																.
Query SS confidence							.						.	.	.																.
Query Sequence		K	R	I	V	L	.	P	E	G	D	E	.	.	.	P	R	T	V	K	A	A	A	I	C	A	E	R	G	I	.	A	T	C	V	L	L	G	N	P	A	E	I	N	R	V	A	A	S	Q	G	V	E	L	G	A	G	I	E	I	V	D	P	E	V	V	R	E	S	Y	V	G	R	L	V	E	L	R	K	N	K
Query Conservation							.						.	.	.																.
Alig confidence							.						.	.	.																.																				.	.	.	.	.
Template Conservation																																																			.	.	.	.	.
Template Sequence		X	K	I	A	V	D	A	X	G	G	D	N	A	P	Q	A	I	V	E	G	V	X	L	A	K	Q	D	F	P	D	I	E	F	Q	L	Y	G	K	E	A	E	I	K	K	Y	I	T	D	E	.	.	.	.	.	K	N	I	T	I	I	H	T	D	E	K	I	A	S	D	D	E	P	V	K	A	I	R	R	K	K
Template Known Secondary structure								S	S		S	T	T	T	T															T	T														T	T		S			.	.	.	.	.	T	T							S					T	T											T
Template Predicted Secondary structure																																																			.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.				.	.	.	.	550	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.
Query SS confidence																																																																				.	.	.
Query Sequence		G	M	T	E	T	V	A	R	E	Q	L	E	D	N	V	V	L	G	T	L	M	L	E	Q	D	E	V	D	G	L	V	S	G	A	V	H	T	T	A	N	T	I	R	P	P	L	Q	L	I	K	T	A	P	G	S	S	L	V	S	S	V	F	F	M	L	L	.	.	.	P	E	Q	V	Y	V	Y	G	D	C	A
Query Conservation																																																																				.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.																			.	.																																.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Sequence		T	A	S	X	.	.	.	.	.	.	.	.	.	.	.	V	L	A	A	Q	A	V	K	N	G	E	A	D	A	I	F	S	A	.	.	G	N	T	G	A	L	L	A	A	G	L	F	I	V	G	R	I	K	N	V	E	R	P	G	L	X	S	T	L	P	V	X	G	E	P	D	K	G	F	D	X	L	D	L	G
Template Known Secondary structure		T	S			.	.	.	.	.	.	.	.	.	.	.										T	S		S					S	.	.	S												T	T		B		T	T		S	S										T	T		T	T								S	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.																			.	.
Template SS confidence
		76	.	.	.												80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		557	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.		580	.	.	.		.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.
Predicted Secondary structure																									.					.
Query SS confidence																									.					.
Query Sequence		I	N	P	D	P	T	A	E	Q	L	A	E	I	A	I	Q	S	A	D	S	A	A	A	.	F	G	I	E	.	P	R	V	A	M	L	S	Y	S	T	G	T	S	G	A	G	S	D	V	E	K	V	R	E	A	T	R	L	A	Q	E	K	R	P	D	L	M	I	D	G	P	L	Q	Y	D	A	A	V	M	A	D
Query Conservation																									.					.
Alig confidence																									.					.										.				.	.	.	.	.	.													.											.	.	.	.	.	.	.	.	.
Template Conservation																																								.				.	.	.	.	.	.													.											.	.	.	.	.	.	.	.	.
Template Sequence		A	N	A	D	N	K	P	E	H	L	V	Q	Y	A	V	L	G	S	F	Y	A	E	K	V	R	N	V	Q	N	P	R	V	G	L	L	N	N	G	.	T	G	S	.	.	.	.	.	.	E	L	T	K	K	A	F	E	L	L	A	A	.	D	E	T	I	N	F	V	G	N	V	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S		S																					T	T			S	S								S		.				.	.	.	.	.	.													.		T	T	S							.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.				.	.	.	.	.	.													.											.	.	.	.	.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.							.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.
		635	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.																															.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	K	S	K	A	P	N	S	P	V	A	G	R	A	T	V	F	I	F	P	D	L	N	T	G	N	T	T	Y	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	R	S	A	D	L	I	S	I	G	P	M	L	Q	G	M	R
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.															.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.															.
Template Sequence		.	.	.	.	.	E	A	R	E	L	L	N	G	V	A	D	V	V	V	.	T	D	G	F	T	G	N	A	V	L	K	S	I	E	G	T	A	X	N	X	X	S	L	L	K	T	A	I	L	S	G	A	L	L	L	K	N	A	L	H	G	X	K	D	E	X	D	Y	S	K	H	G	G	A	V	L	F	G	L	K
Template Known Secondary structure		.	.	.	.	.		G	G	G	G	G	G		S		S				.																													T																	T		G	G	G	G							T	B	S
Template Predicted Secondary structure		.	.	.	.	.															.
Template SS confidence
							210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		685	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	V	N	D	L	S	R	G	A	L	V	D	D	I	V	Y	T	I	A	L	T	A	I	Q	S	A	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	P	V	I	K	T	H	G	A	T	G	P	D	A	V	R	Y	T	I	R	Q	I	H	T	X	L	E	T	Q
Template Known Secondary structure		S							T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions