 |
Job Description | P0A9M8 | Confidence | 90.39% | Date | Thu Jan 5 11:10:45 GMT 2012 |
Rank | 215 | Aligned Residues | 91 |
% Identity | 22% | Template | d1gg4a3 |
SCOP info | MurF and HprK N-domain-like
| MurE/MurF N-terminal domain
| MurE/MurF N-terminal domain
|
Resolution | 2.30 |
|
 |
  |   |
231 | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | |
280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | A | I | D | M | A | R | H | L | N | A | T | I | I | N | E | G | D | I | N | T | R | R | V | K | S | V | T | F | C | A | R | S | I | P | H | M | L | E | H | F | R | A | G | S | L | L | V | T | . |
S | A | D | R | P | D | V | L | V | A | A | C | L | A | A | M | N | G | V | E | I | G | A | L | L | L | T | G | G | Y |
Query Conservation |   |
  |
|   |
|
|
|   |   |
|   |
|   |
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|
|
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|
|
| . |   |
|
|
|   |
|
|   |
|
|
|
|   |
|   |   |   |   |   |   |
|
|   |
|
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |   |   |   |
|   |
|   |   |   | . | . | . | . |   |   |   |
|   |   |
|   |   | . | . | . | . | . | . | . |
|
|
|   |
|   |   |
|   |
|
|
|
|
|   |
|   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |
| . | . | . |
|   |
|
|
|   |   |   |   |
Template Sequence |   |
T | L | S | Q | L | T | D | I | L | N | G | E | L | Q | G | A | . |
. |
. |
. |
D | I | T | L | D | A | V | T | T | . |
. |
. |
. |
. |
. |
. |
D | T | R | K | L | T | P | G | C | L | F | V | A | L | K | G | E | R | F | D | A | H | D | F | A | D | Q | A | K | A | G | G | . |
. |
. |
A | G | A | L | L | V | S | R | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T |  |  |  |  | S |
| . | . | . | . |
|
|  |  | S |
|  |  | S | . | . | . | . | . | . | . |
| G | G | G |
|
| T | T |
|  |  |  |
|
| B |
| S | S |
| B | T | T | T | T |  |  |  |  |  |  | T | T | . | . | . |
|
|  |  |  |  | S | S |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|  |  |  |
|
| . | . | . | . |
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
|
|
|
. | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
|
|
. | . | . | . | . | . | . | . | 70 |
  |
  |   |
310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | M | D | A | R | I | S | K | L | C | E | R | A | F | A | T | G | L | P | V | F | M | V | N | T | N | T | W | Q | T | S | L | S | L | Q | S | F | N | L | E |
Query Conservation |   |
  |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |
|
|
|
|   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |
|   | . |
|   |   |   |
|
|   |   |
|
|   |   |   |
|   |
Template Sequence |   |
L | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | D | L | P | Q | L | I | V | K | . |
D | T | R | L | A | F | G | E | L | A | A | W | V | R | Q |
Template Known Secondary structure |   |
| S | . | . | . | . | . | . | . | . | . | . | . | . | . |
| S | S |
|  |  |  |  | S | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
71 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 80 | . | |
. | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|