Job Description P0A9M8 Confidence 94.64% Date Thu Jan 5 11:10:45 GMT 2012 Rank 138 Aligned Residues 133 % Identity 13% Template c3jvvA_ PDB info PDB header:atp binding protein Chain: A: PDB Molecule:twitching mobility protein; PDBTitle: crystal structure of p. aeruginosa pilt with bound amp-pcp Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	I	I	M	L	I	P	T	G	T	S	V	G	L	T	S	V	S	L	G	V	I	R	A	M	E	R	K	G	V	R	L	S	V	F	K	P	I	A	Q	P	R	T	G	G	D	A	P	D	Q	T	T	T	I	V	R	A	N	S	S	T	T	T	A	A	E	P	L	K	M	S	Y	V	E	G	L	L	S	S
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	R	G	L	V	L	V	T	G	P	T	G	S	G	K	S	T	T	L	A	A	M	L	D	Y	L	N	N	T	K	Y	H	H	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	E	D	P	I	E	F	V	H	E	S	K	K	C	L	V	N	Q	R
Template Known Secondary structure		S	S								S	T	T	S																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S			S					S	S	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.																										.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																															.																											.	.	.	.	.	.	.	.
Query SS confidence																																															.																											.	.	.	.	.	.	.	.
Query Sequence		N	Q	K	D	V	L	M	E	E	I	V	A	N	Y	H	A	N	T	K	D	A	E	V	V	L	V	E	G	L	V	P	T	R	K	H	Q	F	A	Q	S	L	N	Y	E	I	.	A	K	T	L	N	A	E	I	V	F	V	M	S	Q	G	T	D	T	P	E	Q	L	K	E	R	I	.	.	.	.	.	.	.	.
Query Conservation																																															.																											.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.											.																											.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.
Template Sequence		E	V	H	R	D	T	L	G	F	S	E	A	L	R	S	A	L	R	E	D	P	D	I	I	L	V	G	.	.	.	.	.	.	.	.	E	M	R	D	L	E	T	I	R	L	A	L	T	A	A	E	T	G	H	L	V	F	G	T	L	H	T	T	S	A	A	K	T	I	D	R	V	V	D	V	F	P	A	E	E
Template Known Secondary structure			B	T	T	T	B	S										T	T	S			S					S	.	.	.	.	.	.	.	.				S													T	T								S		S	S											T	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.									.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
			153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	E	L	T	R	N	S	F	G	G	A	K	N	T	N	I	T	G	V	I
Query Conservation		.
Alig confidence		.										.	.	.	.
Template Conservation												.	.	.	.
Template Sequence		K	A	M	V	R	S	M	L	S	E	.	.	.	.	S	L	Q	S	V	I
Template Known Secondary structure												.	.	.	.
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.					.	260	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions