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Job DescriptionP0A9M8
Confidence99.46%DateThu Jan 5 11:10:45 GMT 2012
Rank43Aligned Residues222
% Identity13%Templatec3ibgF_
PDB info PDB header:hydrolaseChain: F: PDB Molecule:atpase, subunit of the get complex; PDBTitle: crystal structure of aspergillus fumigatus get3 with bound2 adp
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40..... ....50.........60.........70..
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Query Sequence  MSRIIMLIPTGTSVGLTSVSLGVIRAMERKGVRLSVFKPIAQPRT. . . . . . . . GGDAPDQTTTIVRANSSTTTAAEPLKM
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Template Sequence  KTLRWIFVGGKGGVGKTTTSCSLAIQLAKVRKSVLLISTDPAHNLSDAFGQKFGKEARLVDGYSNLSAMEIDPNGSIQDL
Template Known Secondary structure  SS



SSSSTTSS


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   24.....30.........40.........50.........60.........70.........80.........90.........100...
 
   73......80.........90.........100 .........110.........
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Query Sequence  SYVEGLLSSNQKDVLMEEIVANYHANTK. DAEVVLVEGLVPTRKHQFA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LASQDLAFSIPGVDEAMSFAEVLKQVKSLSYEVIVFDTAPTGHTLRFLQFPTVLEKALAKLSQLSSQFSILGARGGLPGG
Template Known Secondary structure  T


TTS
S

T
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SSTTTTGGGGT

TTGGGGS
TT
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   104.....110.........120.........130.........140.........150.........160.........170.........180...
 
   120.........130.........140.........150.........160.........170.........180..
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Query Sequence  . . . . . . . . . . . . . . . . . QSLNYEIAKTLNAEIVFVMSQGTDTPEQLKERIELTRNSFGGAKNTNITGVIVNKLNAPVDEQ
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Template Sequence  QNIDELLQKMESLRETISEVNTQFKNPDMTTFVCVCIAEFLSLYETERMIQELTSY. . . . . GIDTHAIVVNQLLFPGCEQ
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   207..210.........220.........230.........240.........250.........260.. .......270.........280.
 
   183......190.........200.........210... ......220......... 230.........
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Query Sequence  GRTRPDLSEIFDDSSKAKVNNVDPAKLQESS. PLPVLGAVPWSFDLIA. TRAIDMARHL
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Template Sequence  CNARRKMQKKY. . . . . . . . . . . . LEQIEELYEDFNVVRMPLLVEEVRGKEKLEKFSEML
Template Known Secondary structure  ............TTTS

SS
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STT
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   286...290...... ...300.........310.........320.........330..
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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