Job Description P0A9M8 Confidence 95.47% Date Thu Jan 5 11:10:45 GMT 2012 Rank 118 Aligned Residues 151 % Identity 15% Template c2ywfA_ PDB info PDB header:translation Chain: A: PDB Molecule:gtp-binding protein lepa; PDBTitle: crystal structure of gmppnp-bound lepa from aquifex aeolicus Resolution 2.24 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	I	M	L	I	P	T	G	T	S	V	G	L	T	S	V	S	L	G	V	I	R	A	M	E	R	K	G	V	R	L	S	V	F	K	P	I	A	Q	P	R	T	G	G	D	A	P	D	Q	T	T	T	I	V	R	A	N	S	S	T	T	T	A	A	E	P	L	K	M	S	Y	V	E	G	L	L	S	S	N
Query Conservation
Alig confidence									.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation									.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Sequence		R	N	F	C	I	I	A	.	H	V	D	H	G	K	S	T	L	A	D	R	L	L	E	Y	T	G	A	I	G	I	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	M	Q	A	V	R	M	F	Y	K	A	K	D	.	.	.	.
Template Known Secondary structure									.		T	T	S	S													T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S		S								T	T	.	.	.	.
Template Predicted Secondary structure									.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.																																.	.	40	.	.	.	.	.	.	.	.	.	50
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	D	V	L	M	E	E	I	V	A	N	Y	H	A	N	T	K	D	A	E	V	V	L	V	E	G	L	V	P	T	R	K	H	Q	F	A	Q	S	L	N	Y	E	I	A	K	T	L	N	A	E	I	V	F	V	M	S	Q	G	T	D	T	P	E	Q	L	K	E	R	I	E	L	T	R	N	S	F	G	G	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.																																								.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.																																								.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	T	Y	K	L	H	L	I	D	T	P	G	H	V	D	.	.	.	.	.	F	S	Y	E	V	S	R	A	L	A	A	C	E	G	A	L	L	L	I	D	A	S	Q	G	I	E	A	Q	T	V	A	N	F	W	K	A	V	E	Q	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S													S	G	G	.	.	.	.	.	G										T		S								T	T	T		S														T	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.																																								.	.	.	.
Template SS confidence
																		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.						.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.										.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.
Query Sequence		K	N	T	N	I	T	G	V	I	V	N	K	L	N	A	P	V	D	E	Q	G	R	T	R	P	D	L	S	E	I	F	D	D	.	.	.	.	.	.	.	.	.	S	S	K	A	K	V	N	N	V	D	P	A	K	L	Q	E	S	S	P	L	P
Query Conservation																																			.	.	.	.	.	.	.	.	.
Alig confidence		.						.																											.	.	.	.	.	.	.	.	.
Template Conservation		.						.
Template Sequence		.	D	L	V	I	I	.	P	V	I	N	K	I	D	L	P	S	A	D	V	D	R	V	K	K	Q	I	E	E	V	L	G	L	D	P	E	E	A	I	L	A	S	A	K	E	G	I	G	I	E	E	I	L	E	A	I	V	N	R	I	P	P	P
Template Known Secondary structure		.	T					.						T	T	S	T	T														T				G	G	G					B	T	T	T	T	B	S												S
Template Predicted Secondary structure		.						.
Template SS confidence
			125	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions