Job Description P0A9M8 Confidence 96.75% Date Thu Jan 5 11:10:45 GMT 2012 Rank 90 Aligned Residues 137 % Identity 15% Template c2npiB_ PDB info PDB header:transcription Chain: B: PDB Molecule:protein clp1; PDBTitle: clp1-atp-pcf11 complex Resolution 2.95 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																														.																																											.	.	.	.	.	.	.	.	.
Query SS confidence																														.																																											.	.	.	.	.	.	.	.	.
Query Sequence		I	I	M	L	I	P	T	G	T	S	V	G	L	T	S	V	S	L	G	V	I	R	A	M	E	R	K	G	.	V	R	L	S	V	F	K	P	I	A	Q	P	R	T	G	G	D	A	P	D	Q	T	T	T	I	V	R	A	N	S	S	T	T	T	A	A	E	P	L	K	M	S	.	.	.	.	.	.	.	.	.
Query Conservation																														.																																											.	.	.	.	.	.	.	.	.
Alig confidence										.																				.																																											.	.	.	.	.	.	.	.	.
Template Conservation										.
Template Sequence		R	V	V	I	V	G	G	S	.	Q	T	G	K	T	S	L	S	R	T	L	C	S	Y	A	L	K	F	N	A	Y	Q	P	L	Y	I	N	L	D	P	Q	Q	P	I	F	T	V	P	G	C	I	S	A	T	P	I	S	D	I	L	D	A	Q	L	P	T	W	G	Q	S	L	T	S	G	A	T	L	L	H	N	K
Template Known Secondary structure								S	T	.	T	S	S															T	T											T	T	S		S	B	S		T	T									S				T	T		T	T		S	B	B			S	S			S	S			B
Template Predicted Secondary structure										.
Template SS confidence
		125	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
							74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.									.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure		.	.	.	.	.																																.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	Y	V	E	G	L	L	S	S	N	Q	K	D	V	L	M	E	E	I	V	A	N	Y	H	A	N	T	K	D	A	E	V	.	.	.	.	.	.	.	.	V	L	V	E	G	L	V	P	T	R	K	H	Q	F	A	Q	S	L	N	Y	E	I	A	K	T	L	N	A	E	I	V	F	V	M	S	Q
Query Conservation		.	.	.	.	.																																.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																																.	.	.	.	.	.	.	.																				.
Template Conservation																																																																	.
Template Sequence		Q	P	X	V	K	N	F	G	L	E	R	I	N	E	N	K	D	L	Y	L	E	C	I	S	Q	L	G	Q	V	V	G	Q	R	L	H	L	D	P	Q	V	R	R	S	G	C	I	V	D	T	P	S	I	S	Q	L	D	E	N	L	A	E	L	H	.	H	I	I	E	K	L	N	V	N	I	X	L	V	L	C	S
Template Known Secondary structure										S	S	S	G	G	G																													S									G	G	G	S		T	T						.						T	T
Template Predicted Secondary structure																																																																	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		141	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	T
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		283	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions