Job Description P0A9M8 Confidence 97.99% Date Thu Jan 5 11:10:45 GMT 2012 Rank 72 Aligned Residues 227 % Identity 15% Template c2hi1A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:4-hydroxythreonine-4-phosphate dehydrogenase 2; PDBTitle: the structure of a putative 4-hydroxythreonine-4-phosphate2 dehydrogenase from salmonella typhimurium. Resolution 2.30 Å

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		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.		.	.	.	.	.	450	.	.															.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure																																					.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	E	G	D	E	P	R	T	V	K	A	A	A	I	C	A	E	R	G	I	A	T	C	V	L	L	G	N	P	A	E	I	N	R	V	.	A	A	S	Q	G	V	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	G	I	E	I	V	D	P	E	V	V	R	E	S	Y	V	G	R	L	V	E
Query Conservation																																					.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.									.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		P	A	G	I	G	P	E	I	I	V	K	A	L	S	E	D	G	L	N	G	A	P	L	V	V	I	G	C	L	A	T	L	K	R	L	Q	A	K	G	I	T	P	N	V	E	L	R	A	I	E	R	V	A	E	A	R	F	A	P	G	I	I	H	V	I	D	E	P	L	A	Q	P	E	.	.	.	.	.	.	.
Template Known Secondary structure		T	T	T	T										T	S	T	T	T	T	T		S																T	T	S	S									S	S	G	G	G					T	T										S		G	G	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.												.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	K	N	K	G	M	T	E	T	V	A	R	E	Q	L	E	D	N	V	V	L	G	T	L	M	L	E	Q	D	E	V	D	G	L	V	S	G	A	V	H	T	T	A	N	T	I	R	P	P	.	.	.	.	.	.	.	.	.	.	.	L	Q	L	I	K	T	A	P	G	S	S	L	V	S	S	V	F	F	M
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																																									.	.								.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Template Conservation		.																																									.	.																											.	.	.	.	.	.
Template Sequence		.	A	L	E	A	G	K	V	Q	A	Q	A	G	D	L	A	Y	R	C	V	K	R	A	T	E	L	A	L	R	G	D	V	Q	A	I	A	T	A	P	L	N	.	.	K	E	A	L	H	L	A	G	H	N	Y	P	G	H	T	E	L	L	A	T	L	T	H	S	R	D	.	.	.	.	.	.	Y	A	X	V	L
Template Known Secondary structure		.	G			T	T	S																						T	T	S		S									.	.							T	T				S	S									T	T				.	.	.	.	.	.
Template Predicted Secondary structure		.																																									.	.																											.	.	.	.	.	.
Template SS confidence
			86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.							.	.	.	.	.
		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.									.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.		.	.	.	.	.	.	590					.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610
Predicted Secondary structure																				.	.	.	.	.	.	.	.																							.								.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.																							.								.	.	.	.
Query Sequence		L	L	P	E	Q	V	Y	V	Y	G	D	C	A	I	N	P	D	P	.	.	.	.	.	.	.	.	T	A	E	Q	L	A	E	I	A	I	Q	S	A	D	S	A	A	A	F	G	I	E	.	P	R	V	A	M	L	S	.	.	.	.	Y	S	T	G	T	S	G	A	G	S	D	V	E	K	V	R	E	A	T	R
Query Conservation																				.	.	.	.	.	.	.	.																							.								.	.	.	.
Alig confidence																.	.	.		.	.	.	.	.	.	.	.																							.								.	.	.	.
Template Conservation																.	.	.
Template Sequence		Y	T	D	K	L	K	V	I	H	V	S	T	H	I	.	.	.	A	L	R	K	F	L	D	T	L	S	T	A	R	V	E	T	V	I	G	I	A	D	T	F	L	K	R	V	G	Y	V	K	P	R	I	A	V	A	G	V	N	P	H	A	G	E	N	G	L	F	G	D	E	E	T	R	I	L	T	P	A	I	T
Template Known Secondary structure				S	S						S			S	S	.	.	.																												T	T		S	S								S	S	G	G	G	S	S	T	T	S								T
Template Predicted Secondary structure																.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170				.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		611	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Q	E	K	R	P	D	L	M	I	D	G	P	L	Q	Y	D	A	A	V	M	A	D	V	A	K	S	K	A	P	N	S	P	V	A	G	R	A	T	V	F	I	F	P	D	L	N	T	G	N	T	T	Y	K	A	V
Query Conservation
Alig confidence							.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.																			.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	R	A	K	.	.	G	X	D	V	Y	G	P	C	P	P	D	T	V	F	L	Q	A	Y	.	.	.	.	.	.	.	.	.	.	E	G	Q	Y	D	X	V	V	A	X	Y	H	D	Q	G	H	I	P	L	K	L	L
Template Known Secondary structure					T	T	.	.	T																		.	.	.	.	.	.	.	.	.	.	T	T	S		S					S	S
Template Predicted Secondary structure							.	.																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		234	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.											.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions