Job Description P0A9M8 Confidence 95.16% Date Thu Jan 5 11:10:45 GMT 2012 Rank 128 Aligned Residues 141 % Identity 14% Template c2dy1A_ PDB info PDB header:signaling protein, translation Chain: A: PDB Molecule:elongation factor g; PDBTitle: crystal structure of ef-g-2 from thermus thermophilus Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	R	I	I	M	L	I	P	T	G	T	S	V	G	L	T	S	V	S	L	G	V	I	R	A	M	E	R	K	G	V	R	L	S	V	F	K	P	I	A	Q	P	R	T	G	G	D	A	P	D	Q	T	T	T	I	V	R	A	N	S	S	T	T	T	A	A	E	P	L	K	M	S	Y	V	E	G	L	L	S
Query Conservation
Alig confidence											.															.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Template Conservation											.															.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Template Sequence		M	I	R	T	V	A	L	V	G	.	H	A	G	S	G	K	T	T	L	T	E	A	L	L	.	.	.	.	.	.	.	Y	K	T	G	A	K	E	R	R	G	R	V	E	E	G	T	T	T	T	D	Y	T	P	E	A	K	L	H	R	T	T	V	R	T	G	V	A	P	L	L	F	.	.	.	.	.	.	.	.
Template Known Secondary structure											.	S	T	T	S	S										.	.	.	.	.	.	.			T	T	S	S	S	S				G	G	G	T			S	S			S						T	T	S			S									.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.															.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30								.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	Q	K	D	V	L	M	E	E	I	V	A	N	Y	H	A	N	T	K	D	A	E	V	V	L	V	E	G	L	V	P	T	R	K	H	Q	F	A	Q	S	L	N	Y	E	I	A	K	T	L	N	A	E	I	V	F	V	M	S	Q	G	T	D	T	P	E	Q	L	K	E	R	I	E	L	T	R	N	S	F	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.																																								.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.																																								.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	H	R	V	F	L	L	D	A	P	G	Y	G	D	.	.	.	.	.	F	V	G	E	I	R	G	A	L	E	A	A	D	A	A	L	V	A	V	S	A	E	A	G	V	Q	V	G	T	E	R	A	W	T	V	A	E	R	L	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T											S	G	G	.	.	.	.	.	G												S								T	T	T		S														T	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.																																								.	.
Template SS confidence
																					72	.	.	.	.	.	.	.	80	.	.	.	.	.	.						.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	K	N	T	N	I	T	G	V	I	V	N	K	L	N	A	P	V	D	E	Q	G	R	T	R	P
Query Conservation
Alig confidence		.	.	.						.
Template Conservation		.	.	.						.
Template Sequence		.	.	.	G	L	P	R	M	.	V	V	V	T	K	L	D	K	G	G	D	Y	Y	A	L	L	E	D
Template Known Secondary structure		.	.	.	T					.						G	G	G
Template Predicted Secondary structure		.	.	.						.
Template SS confidence
					126	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions