Job Description P0A9M8 Confidence 87.03% Date Thu Jan 5 11:10:45 GMT 2012 Rank 271 Aligned Residues 114 % Identity 14% Template c2d6fA_ PDB info PDB header:ligase/rna Chain: A: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit d; PDBTitle: crystal structure of glu-trna(gln) amidotransferase in the2 complex with trna(gln) Resolution 3.15 Å

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		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.									.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure																																.	.																											.	.	.	.	.	.	.	.
Query SS confidence																																.	.																											.	.	.	.	.	.	.	.
Query Sequence		L	L	V	T	S	A	D	R	P	D	V	L	V	A	A	C	L	A	A	M	N	G	V	E	I	G	A	L	L	L	.	.	T	G	G	Y	E	M	D	A	R	I	S	K	L	C	E	R	A	F	A	T	G	L	P	V	F	M	.	.	.	.	.	.	.	.	V	N	T	N	T	W	Q	T	S	L	S	L	Q	S
Query Conservation																																.	.																											.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.					.	.																											.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.
Template Sequence		I	K	S	Y	P	G	I	S	P	D	I	I	K	W	H	L	D	E	G	Y	R	.	.	.	.	.	G	I	V	I	E	G	T	G	L	G	H	C	P	D	T	L	I	P	V	I	G	E	A	H	D	M	G	V	P	V	A	M	T	S	Q	C	L	N	G	R	V	N	M	N	V	Y	S	T	G	R	R	L	L	Q
Template Known Secondary structure						T	T												T	T		S	.	.	.	.	.							B	T	T	T	B			G	G	G										T	T								T	T		S	S				T	T	S	S
Template Predicted Secondary structure																							.	.	.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.						.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		346			.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		F	.	.	N	L	E	V	P	V	D	D	H	E	R	I	E	K	V	Q	E	Y	V	A	N	Y	I	N	A	D	W	I	E	S	L	T	A	T	S	E	R	S	R	R	L	S	P	P	A	F	R	Y
Query Conservation			.	.
Alig confidence			.	.
Template Conservation
Template Sequence		A	G	V	I	P	C	D	D	M	L	P	E	V	A	Y	V	K	M	C	W	V	L	G	Q	T	D	D	P	E	M	A	R	E	M	M	R	E	N	I	A	G	E	I	N	E	R	T	S	I	A	Y
Template Known Secondary structure		T	T					T	T														T	T	T													S		S	S	S				S	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions