 |
Job Description | Q46808 | Confidence | 84.01% | Date | Thu Jan 5 12:34:35 GMT 2012 |
Rank | 460 | Aligned Residues | 89 |
% Identity | 17% | Template | d1ryda1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
|
Resolution | 2.20 |
|
 |
  |   |
103 | . | . | . | . | . | . | 110 | . | . | . | . | . | |
. | . | . | . | 120 | . | . | . | . | . | |
. | . | . | . | 130 | |
. | . | . | . | . | . | . | . | |
|
|
. | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|  |  |  | . |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  | . |  |  |
|
|
|  |  |  | . | . | . |
|
|  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | P | R | L | V | L | I | G | A | G | H | V | N | . |
R | A | I | A | Q | S | A | A | L | L | . |
G | F | D | I | A | . |
V | A | D | I | Y | R | E | S | . |
. |
. |
L | N | P | E | L | F | P | P | S | T | T | L | L | H | A | E | S | F | G | A | A | V | E | A | L | D | I | R | P | D | N | F | V | L | I | A | T | N |
Query Conservation |   |
  |
|   |
|   |
|
|
|
|
|
|
|
| . |   |
|
|
|   |
|
|   |   |
| . |
|
|   |
|   | . |
|
|
|   |
|   |
|   | . | . | . |
|   |   |   |   |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   | . | . | . |
|   |
|   |
|   |   |
|
Template Sequence |   |
R | F | G | Y | A | I | V | G | L | G | K | Y | A | L | N | Q | I | L | P | G | F | A | G | C | Q | H | S | R | I | E | A | L | V | S | G | N | A | E | K | A | K | I | V | A | A | E | Y | G | V | D | P | R | K | I | Y | D | Y | S | N | F | D | K | I | A | K | D | P | K | I | . |
. |
. |
D | A | V | Y | I | I | L | P |
Template Known Secondary structure |   |
|  |  |  |  |  |  |
|
| S |  |  |  |  |  | T | T | T | G | G | G | T | T |
| S | S |  |  |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  | T |
|
| T | T | S |  |  |
| T | T | T | G | G | G | G | G | S |
| T | T |
| . | . | . |
|  |  |  |  |
| S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |
|
|
|
| . | . | . |
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | |
|
|
100 | . | . | . | . | . | . | . |
  |
  |   |
177 | . | |
. | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . |
Predicted Secondary structure |   |
|
| . |
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | Q | . |
D | R | E | A | L | D | K | L | I | E | Q | P | I | A | W | L |
Query Conservation |   |
  |   | . |
|   |   |
|
|   |
|
|
|   |   |   |   |   |
|
|
Alig confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|
|
|
|
Template Sequence |   |
N | S | L | H | A | E | F | A | I | R | A | F | K | A | G | K | H | V | M |
Template Known Secondary structure |   |
G | G | G |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
108 | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|