Job Description Q46808 Confidence 100.00% Date Thu Jan 5 12:34:35 GMT 2012 Rank 2 Aligned Residues 248 % Identity 29% Template c3on5B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:bh1974 protein; PDBTitle: crystal structure of a xanthine dehydrogenase (bh1974) from bacillus2 halodurans at 2.80 a resolution Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		N	I	F	T	E	A	A	K	L	E	E	Q	N	C	P	F	A	M	A	Q	I	V	D	S	R	G	S	T	P	R	H	.	S	A	Q	M	L	V	R	A	D	G	S	I	V	G	T	I	G	G	G	M	V	E	R	K	V	I	E	E	S	L	Q	A	L	Q	E	R	K	P	R	L	F	H	G	R	M	A	R	N
Query Conservation																																	.
Alig confidence																																	.										.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.
Template Sequence		S	D	I	E	L	L	E	T	L	A	G	T	D	Q	P	R	V	X	A	T	I	I	H	V	E	G	S	S	Y	R	K	E	G	A	X	X	L	F	Q	E	D	.	.	.	.	.	.	.	.	G	G	C	L	E	T	D	L	T	I	K	A	Q	K	V	W	Q	E	Q	L	P	R	T	V	V	Y	D	L	S	S	E
Template Known Secondary structure												T	T		S												S			S	S		T	T									.	.	.	.	.	.	.	.																			T												T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.									.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		81	.	.	.	.	.	.																																																																			.	.	90	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	D	A	V	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	C	G	G	A	M	S
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	D	L	T	I	S	V	L	L	E	P	V	D	L	K	L	R	Q	H	L	K	R	V	Y	D	Y	L	C	A	G	K	S	V	F	H	V	K	K	L	S	T	S	G	A	V	L	E	Y	A	F	I	L	D	E	S	V	Y	F	G	E	W	H	S	G	H	P	V	E	W	I	R	K	I	D	E	N	E	E	P	L
Template Known Secondary structure		T																													T											T	T	S									S	S	S	S								S	S								T			T	T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	I	S	V	H	G	M	R	P	R	L	V	L	I	G	A	G	H	V	N	R	A	I	A	Q	S	A	A	L	L	G	F	D	I	A	V	A	D	I	Y	R	E	S	L	N	P	E	L	F	P	P	S	T	T	L	L	H	A	E	S	F	G	A	A	V	E	A	L	D	I	R	P	D	N	F	V	L	I	A
Query Conservation
Alig confidence																																																													.
Template Conservation																																																													.
Template Sequence		X	F	T	H	I	Y	S	P	K	E	R	L	I	I	F	G	A	G	P	D	V	P	P	L	V	T	F	A	S	N	V	G	F	Y	T	V	V	T	D	W	R	P	N	Q	C	E	K	H	F	F	P	D	A	D	E	I	I	V	D	.	F	P	A	D	F	L	R	K	F	L	I	R	P	D	D	F	V	L	I	X
Template Known Secondary structure																			S	T	T												T								S		G	G	G	G		G	G	G		T	T		S					S	.									S				T	T
Template Predicted Secondary structure																																																													.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		175	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		T	N	N	Q	.	.	D	R	E	A	L	D	K	L	I	E	Q	P	I	A	W	L	G	L	L	A	S	R	R	K	V	Q	L	F	L	R	Q	L	R	E	K	G	V	A	E	E	H	I	A	R	L	H	A	P	V	G	Y	N	I	G	A	E	T	P	Q	E	I	A	I	S	V	L	A	E	I	L	Q	V	K	N
Query Conservation						.	.
Alig confidence						.	.																																	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.
Template Sequence		T	H	H	F	Q	K	D	Q	E	I	L	H	F	L	L	E	K	E	L	R	Y	I	G	I	L	G	S	K	E	R	T	R	R	L	L	Q	N	R	.	.	.	.	.	.	.	K	P	P	D	H	L	Y	S	P	V	G	L	S	I	D	A	Q	G	P	E	E	I	A	I	S	I	V	A	Q	L	I	Q	L	I	R
Template Known Secondary structure			S													S	S	S			S					S	S									T	T	T	S	.	.	.	.	.	.	.				T	T			S	S		S			S				S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.								.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		253	.	.	.	.			.	.	260	.	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		N	A	P	G	G	.	.	L	M	M	K	P	S	H	P
Query Conservation							.	.
Alig confidence							.	.
Template Conservation
Template Sequence		S	R	K	Q	A	S	S	P	F	S	Y	L	F	Q	P
Template Known Secondary structure			T	T	T	T	T	T	T	T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions