 |
Job Description | Q46808 | Confidence | 84.29% | Date | Thu Jan 5 12:34:35 GMT 2012 |
Rank | 456 | Aligned Residues | 95 |
% Identity | 14% | Template | c2i99A_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:mu-crystallin homolog; |
PDBTitle: crystal structure of human mu_crystallin at 2.6 angstrom
|
Resolution | 2.60 Å |
|
 |
  |   |
101 | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
. | . | |
. | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
| . |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | M | R | P | R | L | V | L | I | G | A | G | H | V | N | R | A | I | A | Q | S | A | A | L | L | . |
G | F | . |
D | I | A | V | A | D | I | Y | R | E | S | L | N | P | E | L | F | P | P | S | T | T | L | L | H | A | E | S | F | G | A | A | V | E | A | L | D | I | R | P | D | N | F | V | L | I | A | T | N | N | Q |
Query Conservation |   |
  |
|   |
|   |
|   |
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |
| . |
|
| . |   |
|   |
|
|
|   |
|   |
|   |
|   |   |   |   |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |
|
|
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |
|
|
|
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   | . | . | . | . | . |
|
|
|
|
|
|
|
|   |
|   |
Template Sequence |   |
P | S | S | E | V | L | C | I | L | G | A | G | V | Q | A | Y | S | H | Y | E | I | F | T | E | Q | F | S | F | K | E | V | R | I | W | N | R | T | K | E | N | A | E | K | F | A | D | T | V | Q | G | E | V | R | V | C | S | S | V | Q | E | A | V | A | G | . |
. |
. |
. |
. |
A | D | V | I | I | T | V | T | L | A | T |
Template Known Secondary structure |   |
T | T |
|
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| S |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  | S | S | S |
|
|  |  |
| S | S |  |  |  |  |  | T | T | . | . | . | . | . |
| S |  |  |  |  |
|
|
|
| S |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
| . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
134 | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 200 | . | . | . | . | . | . | . | . |
  |
  |   |
179 | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | R | E | A | L | D | K | L | I | E | Q | P | I | A | W | L | G | L | L | A | S | R | R |
Query Conservation |   |
|   |   |
|
|   |
|
|
|   |   |   |   |   |
|
|
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |
| . |   |   |
|   |
|
|   |   |
|
|   |   |   |
Template Sequence |   |
E | P | I | L | F | G | E | W | V | . |
K | P | G | A | H | I | N | A | V | G | A | S | R |
Template Known Secondary structure |   |
S |
|
| B |
| G | G | G | S | . |
| T | T |
|  |  |  |  |
|
|
|
| S |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |
| . |
|
|
|
|  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
209 | 210 | . | . | . | . | . | . | . | |
. | . | 220 | . | . | . | . | . | . | . | . | . | 230 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|