Job Description Q46808 Confidence 98.02% Date Thu Jan 5 12:34:35 GMT 2012 Rank 4 Aligned Residues 130 % Identity 15% Template c2g1uA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:hypothetical protein tm1088a; PDBTitle: crystal structure of a putative transport protein (tm1088a) from2 thermotoga maritima at 1.50 a resolution Resolution 1.50 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.																								.
Query SS confidence																																																									.																								.
Query Sequence		G	M	R	P	R	L	V	L	I	G	A	G	H	V	N	R	A	I	A	Q	S	A	A	L	L	G	F	D	I	A	V	A	D	I	Y	R	E	S	L	N	P	E	L	F	P	P	S	T	T	L	L	H	A	E	S	.	F	G	A	A	V	E	A	L	D	I	R	P	D	N	F	V	L	I	A	T	N	N	Q	.
Query Conservation																																																									.																								.
Alig confidence																																																									.																								.
Template Conservation
Template Sequence		Q	K	S	K	Y	I	V	I	F	G	C	G	R	L	G	S	L	I	A	N	L	A	S	S	S	G	H	S	V	V	V	V	D	K	N	E	Y	A	F	H	R	L	N	S	E	F	S	G	F	T	V	V	G	D	A	A	E	F	E	T	L	K	E	C	G	M	E	K	A	D	M	V	F	A	F	T	N	D	D	S
Template Known Secondary structure													S													T	T								S		G	G	G	G	G	G	S		T	T			S					S		T	T	S						T	T	T	G	G	G		S						S	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
			179	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.												.
Query SS confidence		.												.
Query Sequence		.	D	R	E	A	L	D	K	L	I	E	Q	.	P	I	A	W	L	G	L	L	A	S	R	R	K	V	Q	L	F	L	R	Q	L	R	E	K	G	V	A	E	E	H	I	A	R	L	H	A	P	V	G	Y	N	I	G	A	E	T	P	Q	E	I	A	I	S	V	L	A	E	I	L	Q
Query Conservation		.												.
Alig confidence		.												.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template Sequence		T	N	F	F	I	S	M	N	A	R	Y	M	F	N	V	E	N	V	I	A	R	V	Y	D	P	E	K	I	K	I	F	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	I	K	T	.	.	I	C	P	A	V	L	M	I	E	K	V	K	E	F	I	I
Template Known Secondary structure													T	S			S							S	S	G	G	G						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T				.	.
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.																		.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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