Job Description Q46808 Confidence 95.45% Date Thu Jan 5 12:34:35 GMT 2012 Rank 84 Aligned Residues 154 % Identity 14% Template c1d4fD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:s-adenosylhomocysteine hydrolase; PDBTitle: crystal structure of recombinant rat-liver d244e mutant s-2 adenosylhomocysteine hydrolase Resolution 2.80 Å

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.				.	.	.	.	180	.
Predicted Secondary structure																																																																									.	.	.
Query SS confidence																																																																									.	.	.
Query Sequence		R	L	V	L	I	G	A	G	H	V	N	R	A	I	A	Q	S	A	A	L	L	G	F	D	I	A	V	A	D	I	Y	R	E	S	L	N	P	E	L	F	P	P	S	T	T	L	L	H	A	E	S	F	G	A	A	V	E	A	L	D	I	R	P	D	N	F	V	L	I	A	T	.	.	.	N	N	Q	D	R	E
Query Conservation																																																																									.	.	.
Alig confidence																																												.	.	.	.															.	.	.	.	.							.	.	.
Template Conservation																																												.	.	.	.															.	.	.	.	.
Template Sequence		V	A	V	V	A	G	Y	G	D	V	G	K	G	C	A	Q	A	L	R	G	F	G	A	R	V	I	I	T	E	I	E	P	I	N	A	L	Q	A	A	M	E	G	.	.	.	.	Y	E	V	T	T	M	D	E	A	C	K	E	G	N	.	.	.	.	.	I	F	V	T	T	T	G	C	V	D	I	I	L	G	R
Template Known Secondary structure									S														T								S											T	T	.	.	.	.										T	T	T		S	.	.	.	.	.								S	S		S	B
Template Predicted Secondary structure																																												.	.	.	.															.	.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.					.	.	.	.	260	.	.	.	.	.	.	.	.	.						270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.															.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																							.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	D	K	L	I	E	Q	P	I	A	W	L	G	L	L	A	S	R	R	K	.	.	.	V	Q	L	F	L	R	Q	L	R	E	K	G	V	A	E	E	H	I	A	R	L	H	A	P	V	G	Y	N	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	T	P	Q	E	I	A	I	S	V	L
Query Conservation																							.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.															.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.
Template Sequence		H	F	E	Q	M	.	.	K	D	D	A	I	V	C	N	I	G	H	F	D	V	E	I	D	V	K	W	L	N	E	N	A	V	E	K	V	N	I	K	P	Q	V	D	R	Y	L	L	K	N	G	H	R	I	I	L	L	A	E	G	R	L	V	N	L	G	C	A	M	G	H	P	S	F	V	M	S	N	S	F	T
Template Known Secondary structure				T	T	S	.	.		T	T							S	S	S	S		S	B							T	T									T	T							T	T	S							G	G	G	S	B	S					S			S
Template Predicted Secondary structure							.	.
Template SS confidence
		285	.	.	.	.			290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	I	L	Q	V	K	N	N	A	P	G	G	L	M	M	K	P	S	H	P	S	G	H	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Q	V	M	A	Q	I	E	L	W	T	H	P	D	K	Y	P	V	G	V	H	F	L	P	K
Template Known Secondary structure											T	T		G	G	G			S	S
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions