Job Description P69380 Confidence 100.00% Date Thu Jan 5 12:11:26 GMT 2012 Rank 2 Aligned Residues 204 % Identity 100% Template d2qfia2 SCOP info Cation efflux protein transmembrane domain-like Cation efflux protein transmembrane domain-like Cation efflux protein transmembrane domain-like Resolution 3.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	R	L	V	S	R	A	A	I	A	A	T	A	M	A	S	L	L	L	L	I	K	I	F	A	W	W	Y	T	G	S	V	S	I	L	A	A	L	V	D	S	L	V	D	I	G	A	S	L	T	N	L	L	V	V	R	Y	S	L	Q	P	A	D	D	N	H	S	F	G	H	G	K	A	E	S	L	A	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	G	R	L	V	S	R	A	A	I	A	A	T	A	M	A	S	L	L	L	L	I	K	I	F	A	W	W	Y	T	G	S	V	S	I	L	A	A	L	V	D	S	L	V	D	I	G	A	S	L	T	N	L	L	V	V	R	Y	S	L	Q	P	A	D	D	N	H	S	F	G	H	G	K	A	E	S	L	A	A	L
Template Known Secondary structure				S	S	S	S	T	T	S					G	G	G	T	T	T	T	T	B	T	T	B					T	T	S	S								T	T															T	T	S	S	S	S		S	T	T	S	S		S			T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	S	M	F	I	S	G	S	A	L	F	L	F	L	T	G	I	Q	H	L	I	S	P	T	P	M	T	D	P	G	V	G	V	I	V	T	I	V	A	L	I	C	T	I	I	L	V	S	F	Q	R	W	V	V	R	R	T	Q	S	Q	A	V	R	A	D	M	L	H	Y	Q	S	D	V	M	M	N	G	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	S	M	F	I	S	G	S	A	L	F	L	F	L	T	G	I	Q	H	L	I	S	P	T	P	M	T	D	P	G	V	G	V	I	V	T	I	V	A	L	I	C	T	I	I	L	V	S	F	Q	R	W	V	V	R	R	T	Q	S	Q	A	V	R	A	D	M	L	H	Y	Q	S	D	V	M	M	N	G	A	I
Template Known Secondary structure		T	T	T	T	T	T	S	S	S	T	T	G	G	G	S	S		T	T	S	S	T	T	T	S	S	S	S	T	T	T	S						G	G	G	S	S		G	G	G	G	T	T	T					G	G	G			S	T	T	S	G	G	G	G	G	G					T			S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A	L	G	L	S	W	Y	G	W	H	R	A	D	A	L	F	A	L	G	I	G	I	Y	I	L	Y	S	A	L	R	M	G	Y	E	A	V	Q	S	L	L	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	A	L	G	L	S	W	Y	G	W	H	R	A	D	A	L	F	A	L	G	I	G	I	Y	I	L	Y	S	A	L	R	M	G	Y	E	A	V	Q	S	L	L	D	R
Template Known Secondary structure					T	T	S	S		S	S	T	T	S	S	S	S	S	S					T	T	T	T	T	T	T	T	T	T					T	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions