Return to main results Retrieve Phyre Job Id

Job DescriptionP69380
Confidence16.76%DateThu Jan 5 12:11:26 GMT 2012
Rank29Aligned Residues48
% Identity15%Templated1fftb2
SCOP infoTransmembrane helix hairpin Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region
Resolution3.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   50.........60.........70... ......80.........90.......
Predicted Secondary structure 





...
Query SS confidence 























. . .























Query Sequence  IGASLTNLLVVRYSLQPADDNHSF. . . GHGKAESLAALAQSMFISGSALFL
Query Conservation       
 
     
 
      
 ...
  
 
 
  
    

      
Alig confidence 























...























Template Conservation   
  

     


         
    
  


 

 

 


  
   
Template Sequence  PAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIFLAVLT
Template Known Secondary structure  TTTTTTTTSTTT
SS






STT
Template Predicted Secondary structure 













Template SS confidence 


















































   57..60.........70.........80.........90.........100.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions