|   |
219 | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
240 | . | . | . | . | . | |
. | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | |
|
|
. | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  | . |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
Query Sequence |   |
I | D | I | V | T | S | W | P | G | V | S | G | A | H | D | L | R | T | R | Q | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | P | T | R | F | I | . |
Q | I | H | L | E | M | E | D | S | L | P | L | V | Q | A | H | M | V | A | D | Q | V | E | Q | A | I | L | R | R | F | P | . |
. |
. |
G | S | D |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |
| . |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   | . | . | . |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
Template Conservation |   |
|   |
|   |
|   |
|
|
|
|
|
|
|   |   |
|
|
|
|   |
|   |   |   |   |   |   |
|   |
|
|   |   |   |   |
|
|   |   |   |
|   |
|   |   |
|
|
|   |
|   |
| . | . | . | . | . | . | . | . |
|   |
|   |
|   |   |   |
|   |   |   |
|   |
|
|   |   |   |   |
Template Sequence |   |
S | D | A | L | R | R | I | P | G | V | Q | K | A | V | Q | Y | T | L | P | S | E | D | A | L | E | K | A | R | R | G | E | A | G | D | L | T | G | K | Q | T | H | K | R | Q | C | F | V | V | A | D | A | A | . |
. |
. |
. |
. |
. |
. |
. |
D | H | E | R | I | E | N | D | I | R | T | M | P | D | Y | F | V | G | Y | E |
Template Known Secondary structure |   |
 |  |  |  |  | T | S | T | T |
| S |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  | T |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| G | G | . | . | . | . | . | . | . | . | G |  |  |  |  |  |  |  |  |  | T |
| T | T | T | T | T | T | S |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
153 | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . |
  |
  |   |
280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | I | I | H | Q | D | P | C | S | V | V | P | R | E | G | K |
Query Conservation |   |
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|
|
|   |   |
|   |   |   |   |
|   |
Template Sequence |   |
V | E | V | N | F | I | D | E | A | T | F | D | S | E | H | T |
Template Known Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |  |  |  |  | S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
225 | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 |
  |