Return to main results Retrieve Phyre Job Id

Job DescriptionP69380
Confidence41.84%DateThu Jan 5 12:11:26 GMT 2012
Rank14Aligned Residues82
% Identity12%Templatec2y27B_
PDB info PDB header:ligaseChain: B: PDB Molecule:phenylacetate-coenzyme a ligase; PDBTitle: crystal structure of paak1 in complex with atp from2 burkholderia cenocepacia
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   215....220.........230.........240.........250..... ....260.........270.........280.........290..
Predicted Secondary structure 















..











Query SS confidence 








































. .




































Query Sequence  RQEIIDIVTSWPGVSGAHDLRTRQSGPTRFIQIHLEMEDSL. . PLVQAHMVADQVEQAILRRFPGSDVIIHQDPCSVVPR
Query Conservation     
   
     
  
  
     
    
   
 
    ..       
   
   
        
 

 

      
Alig confidence 








































..





















.













Template Conservation 
  

  
     
     
          
   
               
   
   
      .   
       


Template Sequence  PTQIEEQLLKQRALAPHYQIVLTKEGPLDVLTLNVEPCPETAPDTAAIQVAKQALAYDIKSLIGV. TAVINVLPVNGIER
Template Known Secondary structure  TT
TTB
S

TT
B
GGGTT


.


TT
S

Template Predicted Secondary structure 



















.







Template SS confidence 















































































   340.........350.........360.........370.........380.........390.........400.... .....410........
 
   293 ....
Predicted Secondary structure 
.
Query SS confidence 
.



Query Sequence  E. GKRS
Query Conservation   .    
Alig confidence 
.



Template Conservation 



  
Template Sequence  SVGKAR
Template Known Secondary structure 
SSS

Template Predicted Secondary structure 



Template SS confidence 





   419420....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions