Job Description P69380 Confidence 5.43% Date Thu Jan 5 12:11:26 GMT 2012 Rank 86 Aligned Residues 62 % Identity 10% Template c2e1cA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph1519; PDBTitle: structure of putative hth-type transcriptional regulator ph1519/dna2 complex Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	E	E	R	Q	E	I	I	D	I	V	T	S	W	P	G	V	S	G	A	H	D	L	R	T	R	Q	S	G	P	T	R	F	I	Q	I	H	L	E	M	E	D	S	L	P	L	V	Q	A	H	M	V	A	D	Q	V	E	Q	A	I	L	R	R	F	P	G	S	D	V	I	I	H	Q
Query Conservation
Alig confidence																										.	.	.	.				.													.	.	.	.	.	.	.
Template Conservation																										.	.	.	.				.													.	.	.	.	.	.	.
Template Sequence		K	A	G	K	Y	S	E	V	A	S	N	L	A	K	Y	P	E	I	V	E	V	Y	E	T	.	.	.	.	T	G	D	.	Y	D	M	V	V	K	I	R	T	K	N	S	.	.	.	.	.	.	.	E	E	L	N	N	F	L	D	L	I	G	S	I	P	G	V	E	G	T	H	T	M	I
Template Known Secondary structure			T	T											T	S	T	T								.	.	.	.	S	S	S	.	S	S								S	S		.	.	.	.	.	.	.													S	T	T
Template Predicted Secondary structure																										.	.	.	.				.													.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.		.	.	.	.	.	.	.	130	.	.	.	.								.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions