Job Description P69380 Confidence 7.28% Date Thu Jan 5 12:11:26 GMT 2012 Rank 55 Aligned Residues 82 % Identity 9% Template c1v55B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:cytochrome c oxidase polypeptide ii; PDBTitle: bovine heart cytochrome c oxidase at the fully reduced state Resolution 1.90 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	W	Y	T	G	S	V	S	I	L	A	A	L	V	D	S	L	V	D	I	G	A	S	L	T	N	L	L	V	V	R	Y	S	L	Q	P	A	D	D	N	H	S	F	G	H	G	K	A	E	S	L	A	A	L	A	Q	S	M	F	I	S	G	S	A	L	F	L	F	L	T	G	I	Q	H	L	I	S	P	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	S	P	I	M	E	E	L	L	H	F	H	D	H	T	L	M	I	V	F	L	I	S	S	L	V	L	Y	I	I	S	L	M	L	T	T	K	L	T	H	T	S	T	M	D	A	Q	E	V	E	T	I	W	T	I	L	P	A	I	I	L	I	L	I	A	L	P	S	L	R	I	L	Y	M	M	D	E	I	N	N
Template Known Secondary structure		S	S																																T	S		S					S					T	T																													S
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	S
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		93	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions