Job Description P39370 Confidence 6.38% Date Thu Jan 5 12:00:04 GMT 2012 Rank 46 Aligned Residues 40 % Identity 25% Template c3jsbA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:rna-directed rna polymerase; PDBTitle: crystal structure of the n-terminal domain of the lymphocytic2 choriomeningitis virus l protein Resolution 2.13 Å

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		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.				.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		T	S	D	Y	A	S	H	P	Q	H	F	N	H	M	V	E	A	F	.	.	.	R	R	D	L	K	Q	Y	H	S	Q	L	N	N	I	T	D	A	P	W	F	C	G	D	T	T	W	Y
Query Conservation																				.	.	.
Alig confidence																				.	.	.								.	.	.	.	.
Template Conservation																														.	.	.	.	.
Template Sequence		R	S	T	P	A	S	F	E	K	K	F	I	E	D	T	N	K	L	A	C	I	R	E	D	L	A	V	A	.	.	.	.	.	G	V	T	L	V	P	I	V	D	G	R	C	D	Y	D
Template Known Secondary structure			S	S																	T	T							T	.	.	.	.	.	T											S	S
Template Predicted Secondary structure																														.	.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions