Job Description P39370 Confidence 27.15% Date Thu Jan 5 12:00:04 GMT 2012 Rank 24 Aligned Residues 132 % Identity 8% Template c3dc7B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative uncharacterized protein lp_3323; PDBTitle: crystal structure of the protein q88sr8 from lactobacillus plantarum.2 northeast structural genomics consortium target lpr109. Resolution 2.12 Å

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		175	.	.	.	.	180	.	.	.	.	.	.										.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.
Query Sequence		A	C	W	M	Q	G	E	F	D	L	M	T	.	.	.	.	.	.	.	.	.	S	D	Y	A	S	H	P	Q	H	F	N	H	M	V	E	A	F	R	R	D	L	K	Q	Y	H	S	Q	L	N	N	I	T	D	A	P	W	F	C	G	D	T	T	W	Y	W	K	E	N	F	P	H	S	Y	E	A	I	Y	G	N
Query Conservation														.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.
Template Sequence		I	A	V	F	G	G	V	N	D	Y	G	R	D	Q	P	L	G	Q	Y	G	D	C	D	X	T	T	F	Y	G	A	L	X	X	L	L	T	G	L	Q	T	N	W	P	.	.	.	.	.	.	.	.	.	.	T	V	P	K	L	F	I	S	A	I	H	I	G	S	D	F	G	G	S	F	S	A	V	T	N	G	L
Template Known Secondary structure													T	T						T	T			S	T	T	S																S	T	.	.	.	.	.	.	.	.	.	.	T	S									B			S	S	S	B	T	T	B		S	S			T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.											.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	N	N	V	L	A	N	I	I	F	V	D	F	Q	Q	Q	G	E	R	G	L	T	N	A	P	D	E	D	P	D	D	L	S	T	G	Y	Y	G	S	A	Y	R	S	P	E	N	W	T	T	A	L	R	S	S	H	F	S	T	A	A	R	R	G	I	I	S	D	R	F	V	E	A	I	L	Q	F	W	R	E
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.														.
Template Conservation																																												.	.	.	.	.	.	.	.														.
Template Sequence		G	Y	R	Q	S	D	Y	E	A	A	I	A	Q	X	T	A	D	Y	G	V	P	H	L	S	L	Y	R	D	A	G	X	T	F	A	I	P	A	Q	A	A	I	Y	.	.	.	.	.	.	.	.	S	V	D	T	L	H	P	N	N	A	G	H	R	.	V	I	A	R	K	L	Q	S	F	L	D	S	H	F	L	E
Template Known Secondary structure		S																	T	T										S	S		B	T	T	S								.	.	.	.	.	.	.	.	B	S	S	S	S	S	B							.
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.														.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.									.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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