Return to main results Retrieve Phyre Job Id

Job DescriptionP69789
Confidence99.93%DateThu Jan 5 12:11:55 GMT 2012
Rank1Aligned Residues78
% Identity33%Templatec1ibaA_
PDB info PDB header:phoshphotransferaseChain: A: PDB Molecule:glucose permease; PDBTitle: glucose permease (domain iib), nmr, 11 structures
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   72.......80.........90.........100.........110.........120.........130.........140.........150
Predicted Secondary structure 





















Query SS confidence 














































































Query Sequence  QAAGILQALGGVGNISSINNCATRLRIALHDMSQTLDDEVFKKLGAHGVFRSGDAIQVIIGLHVSQLREQLDSLINSHQ
Query Conservation   
  

 



 


  
  
 




 


 
 
  
   
  

 


  
  



 
  
  
   
   
    
Alig confidence 










































.


































Template Conservation 

  

 



  

     
 



  


 
 

   

 
.
  


     



 
  
  
   
   
   
Template Sequence  MAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKL. GAAGVVVAGSGVQAIFGTKSDNLKTEMDEYIRNFG
Template Known Secondary structure 
TT
TT
SB



TT
B
STTSS

T.TSS
TT

SST
Template Predicted Secondary structure 










.









Template SS confidence 














































































   15....20.........30.........40.........50....... ..60.........70.........80.........90..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions