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Job DescriptionP75968
Confidence15.82%DateThu Jan 5 12:16:35 GMT 2012
Rank7Aligned Residues94
% Identity18%Templatec1w8jD_
PDB info PDB header:motor proteinChain: D: PDB Molecule:myosin va; PDBTitle: crystal structure of myosin v motor domain -2 nucleotide-free
Resolution2.7 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60.........70. ........80....... ..90..
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Query Sequence  EYIPLITLPTKYVPPIKDHESFINWALSFGILPCA. . . FAIFAYLISGALDLHN. . . . . . . . . . . . . . . . . . . . . NAAKL
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Template Sequence  YFHYTKQGGSPVIDGIDDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPPKHDPLTIFCDL
Template Known Secondary structure  GSGGG
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   284.....290.........300.........310.........320.........330.........340.........350.........360...
 
   93......100.........110... ......120.........130
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Query Sequence  LRVRYLWDKHLIIKPLSRRAG. . VNRKLNKDEAHNVMSNL
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Template Sequence  MGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDAL
Template Known Secondary structure  T

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   364.....370.........380.........390.........400...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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