 |
Job Description | P06989 | Confidence | 11.17% | Date | Thu Jan 5 10:59:47 GMT 2012 |
Rank | 47 | Aligned Residues | 61 |
% Identity | 13% | Template | d1jeya1 |
SCOP info | SPOC domain-like
| SPOC domain-like
| Ku70 subunit middle domain
|
Resolution | 2.50 |
|
 |
  |   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | G | D | T | A | H | Q | W | L | F | L | Y | Q | L | E | Q | L | L | A | E | R | K | S | A | D | P | E | T | S | Y | T | A | K | L | Y | A | S | G | T | K | R | I | A | Q | K | V | G | E | E | G | V | E | T | A | L | A | A | T | V | H | D |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |   |
|
|   |
|
|
|   |   |
|   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |
|
|   |
|
|   |   |   |   |   |
|
|
|   |
|
|   |   |   |   |
|   |   |   |   |
|   |
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |
Template Sequence |   |
Y | R | S | D | S | F | E | N | P | V | L | Q | Q | H | F | R | N | L | E | A | L | A | L | D | L | M | E | P | E | Q | A | V | D | L | T | L | P | K | V | E | A | M | N | K | R | L | G | S | L | V | D | E | F | K | E | L | V | Y | P | P | D |
Template Known Secondary structure |   |
|
| T | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | S |
|
|
|
|
|
| T | T | S |
|
|  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  | S |
| S |
|
Template Predicted Secondary structure |   |
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
473 | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|