Job Description P06989 Confidence 8.75% Date Thu Jan 5 10:59:47 GMT 2012 Rank 64 Aligned Residues 79 % Identity 19% Template c2rkkA_ PDB info PDB header:lipid transport Chain: A: PDB Molecule:vacuolar protein sorting-associated protein vta1; PDBTitle: crystal structure of s.cerevisiae vta1 n-terminal domain Resolution 2.90 Å

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		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	Q	L	E	Q	L	L	A	E	R	K	S	A	D	P	E	T	S	Y	T	A	K	L	Y	A	S	G	T	K	R	I	A	Q	K	V	G	E	E	G	V	E	T	A	L	A	A	T	V	H	D	R	F	E	L	T	N	E	A	S	D	L	M	Y	H	L	L	V	L	L	Q	D	Q	G	L	D	L	T	T	V
Query Conservation
Alig confidence																													.
Template Conservation																													.
Template Sequence		L	Y	A	V	E	L	I	L	S	E	E	D	R	S	Q	E	M	T	A	L	A	T	E	L	L	D	T	.	I	E	A	F	K	K	E	I	G	L	H	V	M	N	T	L	I	H	D	Q	E	K	A	K	I	Y	M	L	N	F	T	M	S	L	Y	N	E	K	L	K	Q	L	K	D	G	P	W	D	V	M	L	K
Template Known Secondary structure									T	T		T	T																.							T	T			T	T	T	T																														T	S			S
Template Predicted Secondary structure																													.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions