Job Description P06989 Confidence 8.35% Date Thu Jan 5 10:59:47 GMT 2012 Rank 68 Aligned Residues 52 % Identity 27% Template c2pmzQ_ PDB info PDB header:translation, transferase Chain: Q: PDB Molecule:dna-directed rna polymerase subunit a; PDBTitle: archaeal rna polymerase from sulfolobus solfataricus Resolution 3.40 Å

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		95	.	.	.	.	100	.	.	.	.	.	.	.									.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.
Query Sequence		P	T	C	H	K	G	T	S	S	C	F	G	D	.	.	.	.	.	.	.	.	T	A	H	Q	W	L	F	L	Y	Q	L	E	Q	L	L	A	E	R	K	S	A	D	P	E	T	S	Y	T	A	K	L	Y	A	S	G	T	K	R	I	A	Q	K	V	G	E	E	G	V	E	T	A
Query Conservation															.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	T	C	G	N	T	L	G	N	C	P	G	H	F	G	H	I	E	L	V	R	P	V	I	H	V	G	L	V	K	H	I	Y	E	F	L	K	.	.	.	.	.	.	.	.	.	.	.	.	A	K	L	T	P	S	D	I	R	E	R	L	E	K	I	P	D	S	D	V	E	I	L
Template Known Secondary structure		S	S	S				S	S												S	S					T	T	T								T	T	.	.	.	.	.	.	.	.	.	.	.	.													T	T	S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.													.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions