 |
Job Description | P23485 | Confidence | 55.99% | Date | Thu Jan 5 11:39:31 GMT 2012 |
Rank | 23 | Aligned Residues | 100 |
% Identity | 10% | Template | d1dgwa_ |
SCOP info | Double-stranded beta-helix
| RmlC-like cupins
| Germin/Seed storage 7S protein
|
Resolution | 1.70 |
|
 |
  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | S | E | T | G | E | G | L | R | A | D | Y | R | T | A | K | G | T | V | S | R | Q | Q | L | E | D | G | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | L | T | L | N | T | Q | S | A | A | D | V | R | F | D | A | H | Q | R | T | V | R | L | W | Y | G | E | I | A | I | T | T | A | K | D | A | L | Q | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |
|   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |
|   |   |   |
|   |
|   |   |   |
|   |   |   |   |
|   |
|   |
|   |   |
|
|
|   |
|   |
|
|   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|   |   |
|   |
|
|   |
|
|   |   |
|   |
|   |   |   |
|
|   |   |   |   |   |   |
Template Sequence |   |
Y | L | F | R | S | N | K | F | L | T | L | F | K | N | Q | H | G | S | L | R | L | L | Q | R | F | N | E | D | T | E | K | L | E | N | L | R | D | Y | R | V | L | E | Y | C | S | K | P | N | T | L | L | L | P | H | H | S | D | S | D | L | L | V | L | V | L | E | G | Q | A | I | L | V | L | V | N | P | D | G | R | D |
Template Known Secondary structure |   |
T |
|
|
| G | G | G |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
|
| T | T | S | S |
| G | G | G | G | G | G | T | T |  |  |  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  | T | T |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
49 | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
  |
  |   |
167 | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | F | R | V | L | T | R | Q | G | Q | L | T | A | L | G | T | E | F | T | V | R | Q | Q | D | N | F | T | Q | L | D | V | Q | Q |
Query Conservation |   |
|
|   |
|   |
|   |   |   |   |
|   |
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|
|
|   |   |
|
|
|
|   |   |
|   |
|   |
|   |   |   |   |
|   |
|   |   |
|   |
Template Sequence |   |
T | Y | K | L | D | Q | G | D | A | I | K | I | Q | A | G | T | P | F | Y | L | I | N | P | D | N | N | Q | N | L | R | I | L | K |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |
|  |  |  |  |
| T | T |
|
|  |  |  |  |  |
|
| S | S | S |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|