Job Description P23485 Confidence 19.02% Date Thu Jan 5 11:39:31 GMT 2012 Rank 67 Aligned Residues 116 % Identity 14% Template c3rnsA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cupin 2 conserved barrel domain protein; PDBTitle: cupin 2 conserved barrel domain protein from leptotrichia buccalis Resolution 2.07 Å

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		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160							.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.																					.	.	.	.
Query SS confidence																																											.	.	.	.	.	.																					.	.	.	.
Query Sequence		R	Q	Q	L	E	D	G	S	L	L	T	L	N	T	Q	S	A	A	D	V	R	F	D	A	H	Q	R	T	V	R	L	W	Y	G	E	I	A	I	T	T	A	.	.	.	.	.	.	K	D	A	L	Q	R	P	F	R	V	L	T	R	Q	G	Q	L	T	A	L	.	.	.	.	G	T	E	F	T	V	R	Q	Q
Query Conservation																																											.	.	.	.	.	.																					.	.	.	.
Alig confidence																																											.	.	.	.	.	.																					.	.	.	.
Template Conservation
Template Sequence		K	K	T	I	S	N	G	D	F	L	E	I	T	A	N	H	N	Y	S	I	E	A	R	D	N	L	K	L	I	E	I	G	E	K	I	S	A	F	N	L	A	E	V	V	E	Y	Q	E	G	K	I	V	S	K	N	L	V	A	K	P	N	L	V	X	T	I	X	S	F	W	K	G	E	S	L	D	P	H	K	A
Template Known Secondary structure							T	T							S	S								S	S	S															S	G	G	G	S				T	T											T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	F	T	Q	L	D	V	Q	Q	H	A	V	E	V	L	L	A	S	A	P	A	Q	K	R	I	V	N	A	G	E	S	L	Q	F	S	A	S	E	F	G	A	V	K	P	L	D	D	E
Query Conservation
Alig confidence																		.	.	.
Template Conservation																		.	.	.
Template Sequence		P	G	D	A	L	V	T	V	L	D	G	E	G	K	Y	Y	.	.	.	V	D	G	K	P	F	I	V	K	K	G	E	S	A	V	L	P	A	N	I	P	H	A	V	E	A	E	T	E	N
Template Known Secondary structure		S	S															.	.	.		T	T							T	T							T	T	S								S	S
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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