Job Description P23485 Confidence 96.23% Date Thu Jan 5 11:39:31 GMT 2012 Rank 3 Aligned Residues 64 % Identity 14% Template c2y3mA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:protein transport protein hofq; PDBTitle: structure of the extra-membranous domain of the secretin2 hofq from actinobacillus actinomycetemcomitans Resolution 2.30 Å

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		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	S	F	S	D	K	P	L	G	E	V	I	A	T	L	T	R	Y	R	N	G	V	L	R	C	D	P	A	V	A	G	L	R	L	S	G	T	F	P	L	K	N	T	D	A	I	L	N	V	I	A	Q	T	L	P	V	K	I	Q	S	I	T	R	Y	W	I	N	I	S	P
Query Conservation
Alig confidence																														.	.	.	.	.	.																																.
Template Conservation																														.	.	.	.	.	.																																.
Template Sequence		S	I	R	L	K	Q	A	P	L	V	P	T	L	Q	Q	L	A	L	A	H	N	T	N	L	I	I	D	T	.	.	.	.	.	.	V	S	L	Q	L	E	N	V	D	L	D	Q	L	F	R	S	V	A	K	I	K	Q	L	D	L	W	Q	E	N	G	I	.	Y	Y	F	T	K
Template Known Secondary structure																	S				T	T								.	.	.	.	.	.								S														T										.
Template Predicted Secondary structure																														.	.	.	.	.	.																																.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.							60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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