Return to main results Retrieve Phyre Job Id

Job DescriptionP23485
Confidence61.20%DateThu Jan 5 11:39:31 GMT 2012
Rank20Aligned Residues68
% Identity7%Templatec2pfwB_
PDB info PDB header:unknown functionChain: B: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of a rmlc-like cupin (sfri_3105) from shewanella2 frigidimarina ncimb 400 at 1.90 a resolution
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130.........140.........150.........160.........170.........180.........190.........
Predicted Secondary structure 






















Query SS confidence 







































































Query Sequence  LLTLNTQSAADVRFDAHQRTVRLWYGEIAITTAKDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQ
Query Conservation   
 
   
 
   
    
 
 
  


 
 

     


 
 
    
 



 
 
        
 
  
Alig confidence 































....



































Template Conservation       

     
 
   
   

 
      ....      
  

    
    
          
 
  
Template Sequence  KIWFDKGAEGYVHAHRHSQVSYVVEGEFHVNV. . . . DGVIKVLTAGDSFFVPPHVDHGAVCPTGGILIDTFS
Template Known Secondary structure 
TT

SS
....TT
TT

TT

TT
Template Predicted Secondary structure 















....














Template SS confidence 







































































   37..40.........50.........60........ .70.........80.........90.........100....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions