Return to main results Retrieve Phyre Job Id

Job DescriptionP23485
Confidence96.14%DateThu Jan 5 11:39:31 GMT 2012
Rank4Aligned Residues71
% Identity14%Templatec2a02A_
PDB info PDB header:membrane protein, metal transportChain: A: PDB Molecule:ferric-pseudobactin 358 receptor; PDBTitle: solution nmr structure of the periplasmic signaling domain2 of the outer membrane iron transporter pupa from3 pseudomonas putida.
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   246...250.........260.........270. ........280.........290.........300.........310......
Predicted Secondary structure 






.











Query SS confidence 

























.












































Query Sequence  ILSFSDKPLGEVIATLTRYRNGVLRC. DPAVAGLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINISP
Query Conservation   
 
    
  
   
 

    
  .
  
     

 
        
  
     
 
           
Alig confidence 

























.












































Template Conservation 
  
    
  

  
  


    
                 
   

  

    
 
 
    


   
Template Sequence  TLDIPAQSMNSALQALAKQTDTQLLYSPEDIGGLRSSALKGRHDLQSSLRILLQGTGLRYQIDGNTVTVTAS
Template Known Secondary structure 



SSBT


TTTTTT
B




S
TTS

TT

Template Predicted Secondary structure 




























Template SS confidence 







































































   5....10.........20.........30.........40.........50.........60.........70......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions