|   |
35 | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | H | V | G | I | K | V | T | S | T | T | E | F | C | V | S | C | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
S | M | Q | P | V | Y | E | E | Y | K | Q | S | V | H | F | Q | N | A | S | G | V | R | A | E | C | H | D | C | H | I | P | P | D | I | P | G | M | V | K | R | K | L | E | A | S | N | D | I | Y | Q | T | F | I |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|
|
| . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |
|   |   |
|   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|   |   |   |
|   |
|   |
|
|   |   |
|
|
|   |   |   |
|   |
|
|
|
|
|
|   |   |   |   |
|   |
|   |   | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |
|
Template Sequence |   |
V | E | G | M | I | K | Y | Y | D | E | I | N | F | S | D | W | T | H | N | I | S | K | T | P | M | L | K | A | Q | H | P | G | F | E | F | W | K | S | G | I | H | G | Q | . |
. |
. |
. |
K | G | V | S | C | A | D | C | H | M | P | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | Q | E | G | S | V | K | Y | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |
| T | T | T |
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  | S |  |  |  |  | . | . | . | . | T | T |
|
|  |  |  |  |  | S |
|  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  | T | T |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . |
|
|
|
|  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
253 | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | |
|
|
|
. | . | . | . | 300 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | 310 | . | . | . | . | . | . |
  |
  |   |
106 | . | . | . | |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |
Predicted Secondary structure |   |
|
|
|
| . |
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | H | S | I | . |
D | T | P | E | K | F | E | A | K | R | A | E | L | A | E | R | E | W | A | R | M | K | E | N | N | S | A | T | C | R | S | C | H | N |
Query Conservation |   |
  |   |   |   | . |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |
|
|
|   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|
|   |
Template Sequence |   |
D | H | Q | V | K | E | N | P | L | D | S | M | D | Q | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
C | M | N | C | H | R |
Template Known Secondary structure |   |
|
| S |
|
| S |
| G | G | G | G |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T | T | T |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
317 | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . |
  |