 |
Job Description | P33226 | Confidence | 83.35% | Date | Thu Jan 5 11:51:25 GMT 2012 |
Rank | 165 | Aligned Residues | 54 |
% Identity | 30% | Template | d1iqca2 |
SCOP info | Cytochrome c
| Cytochrome c
| Di-heme cytochrome c peroxidase
|
Resolution | 1.80 |
|
 |
  |   |
319 | 320 | . | . | . | . | . | . | . | |
. | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 350 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
A | Y | A | D | S | L | Y | N | G | . |
T | C | N | Q | C | H | G | A | P | E | I | A | H | F | D | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | G | W | I | G | T | L |
Query Conservation |   |
  |   |
|   |   |   |   |   |   | . |   |
|   |   |
|
|
|   |   |   |   |   |   |
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|
|   |   |   |
|
|
|   |
|
|   |   |   |   |
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|   |
|
|
|   |   |   |
|
|
Template Sequence |   |
L | E | G | Y | N | L | F | K | G | S | G | C | V | Q | C | H | N | G | P | A | V | G | G | S | S | Y | Q | K | M | G | V | F | K | P | Y | E | T | K | N | P | A | A | G | R | M | D | V | T | G | N | E | A | D | R | N | V | F | K | V | P | T | L | R | N | I | E | L | T | Y | P | Y | F | H | D | G | G | A | A | T | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | G | G | G | T | S |
| T | T | T | T | S |
| S | S |  |  |  | S |
| S | S | S |
|
|
|
| S |
|
|
|
| B | T |  |  |  |  |
|
| G | G | G | T | T |  |  |  |
|
|
|
| T | T | G | G | G | S |
| S | B | S | T | T |
|
| B |
| S |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
172 | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . |
  |
  |   |
351 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | G | M | I | G | F | T | . |
. |
. |
. |
. |
. |
. |
S | L | D | K | R | E | E | R | T | L | L | K | Y | L | Q |
Query Conservation |   |
  |   |
|   |   |   |   | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|
|
|
|
|   |
Template Sequence |   |
E | Q | A | V | E | T | M | G | R | I | Q | L | N | R | E | F | N | K | D | E | V | S | K | I | V | A | F | L | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
252 | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|