Job Description P33226 Confidence 95.87% Date Thu Jan 5 11:51:25 GMT 2012 Rank 45 Aligned Residues 54 % Identity 17% Template c2zxyA_ PDB info PDB header:oxygen binding, transport protein Chain: A: PDB Molecule:cytochrome c552; PDBTitle: crystal structure of cytochrome c555 from aquifex aeolicus Resolution 1.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		321	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.																													.	340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure										.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query SS confidence										.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query Sequence		A	D	S	L	Y	N	G	T	.	C	N	Q	C	H	G	A	P	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	F	D	A	N	G	W	I	G	T	L	N	G	.	M	I	G	F	T	S	L	D	K	R	E	E	R	T	L	L	K	Y
Query Conservation										.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Alig confidence										.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation
Template Sequence		G	K	A	I	F	Q	Q	K	G	C	G	S	C	H	Q	A	N	V	D	T	V	G	P	S	L	K	K	I	A	Q	A	Y	A	G	K	E	D	Q	L	I	K	F	L	K	G	E	A	P	A	I	V	D	P	A	K	E	A	I	M	K	P	Q	L	T	M	L	K	G	L	S	D	A	E	L	K	A	L	A	D	F
Template Known Secondary structure									T	T	G	G	G	T			S	S	S		S	S	S										T	T	T										T	T		S			S	S		G	G	G					G	G	G	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		371	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	M	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	S	H
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions