Return to main results Retrieve Phyre Job Id

Job DescriptionP33226
Confidence97.70%DateThu Jan 5 11:51:25 GMT 2012
Rank14Aligned Residues68
% Identity34%Templatec2vr0A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:cytochrome c nitrite reductase, catalytic subunit nfra; PDBTitle: crystal structure of cytochrome c nitrite reductase nrfha2 complex bound to the hqno inhibitor
Resolution2.8 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50..... ....60.........70.........80.........90.........100.........110....
Predicted Secondary structure 











.........































Query SS confidence 











. . . . . . . . .


























































Query Sequence  TTEFCVSCHSMQ. . . . . . . . . PVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQTFIAHSIDTPEK
Query Conservation     

 


 
 .........        
 
  
  
  
 
 


 
         
                
    
Alig confidence 











.........














....









...........


















Template Conservation 
    
  
  


   
  




    
 
  

....








 ...........    

   


 
 


 
Template Sequence  EGKFADWTHPASKTPMIKAQHPEYETWINGTHGAAG. . . . VTCADCHMSY. . . . . . . . . . . TRSDDKKKISSHWWTSPMK
Template Known Secondary structure  TT


S
TTT







TTSTTGGGT....

T
...........TT



S
GGG
Template Predicted Secondary structure 




















....





...........















Template SS confidence 















































































   278.280.........290.........300.........310... ......320... ......330.........340..
 
   115....120.........130.........140...
Predicted Secondary structure 












Query SS confidence 




























Query Sequence  FEAKRAELAEREWARMKENNSATCRSCHN
Query Conservation          
           
  
  

 
Alig confidence 




.................






Template Conservation       .................

  

 
Template Sequence  DPEMR. . . . . . . . . . . . . . . . . ACRQCHS
Template Known Secondary structure  STT
T.................TTTTTTT
Template Predicted Secondary structure 


.................


Template SS confidence 




























   343.... ..350....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions