 |
Job Description | P33226 | Confidence | 31.78% | Date | Thu Jan 5 11:51:25 GMT 2012 |
Rank | 192 | Aligned Residues | 45 |
% Identity | 18% | Template | c2kybA_ |
PDB info |
PDB header:toxin | Chain: A: PDB Molecule:mannosyl-glycoprotein endo-beta-n-acetylglucosamidase |
PDBTitle: solution structure of cpr82g from clostridium perfringens. north east2 structural genomics consortium target cpr82g
|
Resolution | UNK |
|
  |   |
205 | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | |
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | L | Y | S | I | D | I | K | P | I | Y | A | A | K | G | . |
D | K | E | A | S | G | S | L | L | P | A | S | E | V | K | V | L | K | R | D | G | D | W | L | Q | I | E | I | T | G |
Query Conservation |   |
  |   |
|   |   |
|   |   |
|
|   |   |   |   |   | . |   |   |   |   |   |
|   |
|   |
|   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |   |
|
|
|
|   |   |
|   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|
Template Sequence |   |
I | V | N | V | S | S | S | L | N | V | R | S | S | A | S | T | S | S | K | V | I | G | S | L | S | G | N | T | K | V | T | I | V | G | E | E | G | A | F | Y | K | I | E | Y | K | G |
Template Known Secondary structure |   |
 |
|
|
|
| S |
|
|  |  | B | S | S | S |
| G | G | G |
|
|
|  |  |
|
| T | T |
|  |  |
|
|
|
|  |  | T | T |  |  |  |
|
| B | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|