Job Description P0AEM9 Confidence 28.87% Date Thu Jan 5 11:23:44 GMT 2012 Rank 92 Aligned Residues 190 % Identity 11% Template d2fyia1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.80

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		66	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		F	E	V	E	F	A	Q	Q	L	A	K	H	L	.	G	V	E	A	S	L	K	P	T	K	W	D	G	M	L	A	S	L	D	S	K	R	I	D	V	V	I	N	Q	V	T	I	S	D	E	R	K	K	K	Y	D	F	S	T	P	Y	T	I	S	G	I	Q	A	L	V	K	K	G	N	E	G	T	I	K	T	A
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		S	L	P	E	V	I	K	A	F	R	E	L	F	P	E	V	R	L	E	L	I	Q	G	T	P	Q	E	I	A	T	L	L	Q	N	G	E	A	D	I	G	I	A	S	E	R	L	S	N	D	P	Q	L	V	A	F	P	W	F	R	W	H	H	S	L	L	V	P	H	D	H	P	L	T	Q	I	S	P	L	T	L
Template Known Secondary structure		T													T	T																				T	S		S					S	S	S	S	T	T		T	T																	T	T		G	G	G	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160							.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.
Query Sequence		D	D	L	K	G	K	K	V	G	V	G	L	G	T	N	Y	.	.	.	.	.	.	E	E	W	L	R	Q	N	V	Q	G	V	D	V	R	T	Y	D	D	D	P	T	K	Y	Q	D	L	R	V	G	R	I	D	A	I	L	V	D	R	L	A	A	L	D	L	V	K	K	T	N	D	T	L	A	V	T	G	E	A
Query Conservation																		.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.																																				.	.
Template Conservation																																																											.	.
Template Sequence		E	S	I	A	K	W	P	L	I	T	Y	R	Q	G	I	T	G	R	S	R	I	D	D	A	F	A	R	K	G	L	L	A	D	I	V	L	S	A	Q	D	S	D	V	I	K	T	Y	V	A	L	G	L	G	I	G	L	V	.	.	A	E	Q	S	S	G	E	Q	E	E	E	N	L	I	R	L	D	T	R	H	L
Template Known Secondary structure					T	T	S							T	T	S	T	T											T	T										S	S											T	S						.	.		G	G	G	G	S	T	T			T	T							T	T	T
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	R	Q	E	S	G	V	A	L	R	K	G	N	E	D	L	L	K	A	V	N	D	A	I	A	E	M	Q	K	D	G	T	L	Q	A	L	S	E	K
Query Conservation
Alig confidence																	.
Template Conservation																	.
Template Sequence		F	D	A	N	T	V	W	L	G	L	K	R	G	Q	L	.	Q	R	N	Y	V	W	R	F	L	E	L	C	N	A	G	L	S	V	E	D	I	K	R	Q
Template Known Secondary structure		S											T	T			.														S	S	S
Template Predicted Secondary structure																	.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions