Job Description P0AEM9 Confidence 93.77% Date Thu Jan 5 11:23:44 GMT 2012 Rank 56 Aligned Residues 203 % Identity 13% Template d1p99a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.70

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.																.
Query SS confidence																																																.																.
Query Sequence		T	L	L	V	G	L	E	G	T	Y	P	P	F	S	F	Q	G	D	D	G	K	L	T	G	F	E	V	E	F	A	Q	Q	L	A	K	H	L	G	V	E	A	S	L	K	P	T	.	K	W	D	G	M	L	A	S	L	D	S	K	R	I	D	.	V	V	I	N	Q	V	T	I	S	D	E	R	K	K	K	Y	D
Query Conservation																																																.																.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.																				.																.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	T	I	G	V	A	S	N	D	T	K	A	W	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	V	K	E	L	A	K	K	D	D	I	D	V	E	I	K	H	F	S	D	Y	N	L	P	N	K	A	L	N	D	G	D	I	D	M	N	A	F	Q	H	F	A	F	L	D	Q	Y	K	K	A	H	K
Template Known Secondary structure								S	S	S						.	.	.	.	.	.	.	.	.	.	.	.	.								G	G	G	T									S	S	T	T	S							T	T	S	S	S																		T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.														.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.																							.	.	.
Predicted Secondary structure																													.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	S	T	P	Y	T	I	S	G	I	Q	A	L	V	K	K	G	N	E	G	T	I	K	T	A	D	D	.	L	K	G	K	K	V	G	V	G	L	G	T	N	Y	E	E	W	L	R	Q	N	V	Q	G	V	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	Y
Query Conservation																													.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	T	K	I	S	A	L	S	T	T	V	L	A	P	L	G	I	Y	S	D	K	I	K	D	V	K	K	V	K	D	G	A	K	V	V	I	P	N	D	V	S	N	Q	A	R	A	L	K	L	L	E	A	A	G	L	I	K	L	K	K	D	F	G	L	A	G	T	V	K	D	I	T	S	N	P	K	H	L	K	I
Template Known Secondary structure		T																			S	S		S		G	G	G			T	T								S														T	T	S					T	T			T	T			G	G	G					T	T
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																																								.	.	.	.																		.	.
Query SS confidence																																								.	.	.	.																		.	.
Query Sequence		D	D	D	P	T	K	Y	Q	D	L	R	V	G	R	I	D	A	I	L	V	D	R	L	A	A	L	D	L	V	K	K	T	N	D	T	L	A	V	.	.	.	.	T	G	E	A	F	S	R	Q	E	S	G	V	A	L	R	K	G	.	.	N	E	D	L	L	K	A	V	N	D	A	I	A	E	M	Q	K	D	G
Query Conservation																																								.	.	.	.																		.	.
Alig confidence																																								.	.	.	.																		.	.													.	.	.	.
Template Conservation																																																																											.	.	.	.
Template Sequence		T	A	V	D	A	Q	Q	T	A	R	A	L	S	D	V	D	I	A	V	I	N	N	G	V	A	T	K	A	G	K	D	P	K	N	D	P	I	F	L	E	K	S	N	S	D	A	V	K	P	Y	I	N	I	V	A	V	N	D	K	D	L	D	N	K	T	Y	A	K	I	V	E	L	Y	.	.	.	.	H	S	K
Template Known Secondary structure						G	G	G	T	T	G	G	G	G	T	S	S												T	T			T	T	T	S		S						S	S	G	G	G	G	G	G								G	G	G	T	T												.	.	.	.		S
Template Predicted Secondary structure																																																																											.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.					260	.	.
		251	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	Q	A	L	S	E	K	W	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	Q	K	A	L	Q	E	D	V	K
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions