Job Description P0AEM9 Confidence 99.96% Date Thu Jan 5 11:23:44 GMT 2012 Rank 28 Aligned Residues 219 % Identity 18% Template d1ii5a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.60

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		E	R	G	T	L	L	V	G	L	E	G	T	Y	P	P	F	S	F	Q	G	D	D	G	K	L	T	G	F	E	V	E	F	A	Q	Q	L	A	K	H	L	G	V	E	A	S	L	K	P	T	.	K	W	D	G	M	L	A	S	L	D	S	K	R	I	D	V	V	I	N	Q	V	T	I	S	D	E	R	K	K	K
Query Conservation																																																			.
Alig confidence												.									.	.	.																												.
Template Conservation												.									.	.	.
Template Sequence		S	A	M	A	L	K	V	G	V	V	.	G	N	P	P	F	V	F	Y	.	.	.	G	A	F	T	G	I	S	L	D	V	W	R	A	V	A	E	S	Q	K	W	N	S	E	Y	V	R	Q	N	S	I	S	A	G	I	T	A	V	A	E	G	E	L	D	I	L	I	G	P	I	S	V	T	P	E	R	A	A	I
Template Known Secondary structure			S									.			T	T	T				.	.	.					S														T									S											T	T	S		S														T	S
Template Predicted Secondary structure												.									.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.				20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	F	S	T	P	Y	T	I	S	G	I	Q	A	L	V	K	K	G	N	E	G	T	I	K	T	A	D	D	L	K	G	K	K	V	G	V	G	L	G	T	N	Y	E	E	W	L	R	Q	N	V	Q	G	V	D	V	R	T	Y	D	D	D	P	T	K	Y	Q	D	L	R	V	G	R	I	D	A	I	L	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	I	T	F	T	Q	P	Y	F	S	S	G	I	G	L	L	I	P	G	T	A	T	P	L	F	R	S	V	G	D	L	K	N	K	E	V	A	V	V	R	D	T	T	A	V	D	W	A	N	F	Y	Q	A	D	V	R	E	T	N	N	L	T	A	A	I	T	L	L	Q	K	K	Q	V	E	A	V	M	F	D
Template Known Secondary structure		T	T																		G	G	G	T	T	T		S	S	G	G	G	G	T	T							T	T	S									T	T							S	S										T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		198	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		R	L	A	A	L	D	L	V	K	K	T	N	.	D	T	L	A	V	T	G	E	A	F	S	R	Q	E	S	G	V	A	L	R	K	G	N	E	D	L	L	K	A	V	N	D	A	I	A	E	M	Q	K	D	G	T	L	Q	A	L	S	E	K	W	F	G	A
Query Conservation														.
Alig confidence														.																									.
Template Conservation																																							.
Template Sequence		R	P	A	L	I	Y	Y	T	R	Q	N	P	N	L	N	L	E	V	T	E	I	R	V	S	L	E	P	Y	G	F	V	L	K	E	N	S	P	.	L	Q	K	T	I	N	V	E	M	L	N	L	L	Y	S	R	V	I	A	E	F	T	E	R	W	L	G	E
Template Known Secondary structure													G	G	G						S			S											T	T		T	.	T														T	T
Template Predicted Secondary structure																																							.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions