Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEM9
Confidence96.83%DateThu Jan 5 11:23:44 GMT 2012
Rank46Aligned Residues200
% Identity17%Templatec3uifA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:sulfonate abc transporter, periplasmic sulfonate-binding PDBTitle: crystal structure of putative sulfonate abc transporter, periplasmic2 sulfonate-binding protein ssua from methylobacillus flagellatus kt
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70........ .80....... ..90.........100.........110..
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Query Sequence  GTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQLAKHL. . . . GVEASLKPT. . . . KWDGMLASLDSKRIDVVINQVTISD
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Template Sequence  KVVRIAS. . . . . VATNVGGKTVYAGSASLVVNGAFPEELRKQGIKVEWVPAAXASVGPVINEGFASGKIDFGIYGDLPPI
Template Known Secondary structure  .....TT
TSSTT
TT
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S
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   28.30.... .....40.........50.........60.........70.........80.........90.........100..
 
   113.... ..120.........130.........140.........150.........160.........170....... ..180....
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Query Sequence  ERKKK. . YDFSTPYTISGIQALVKKGNEGTIKTADDLKGKKVGVGLGTNYEEWLRQNVQGVDVRTYD. . . . . . DDPTKYQ
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Template Sequence  ILNASKPTVQLVAPWGTTSNSYLVVPKNSTAKSIKDLKGKKIALHRGRPWELAFSNLLQSEGLTFKDFKIVNVNPQVGAA
Template Known Secondary structure  S








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SGGGGTTS
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   103......110.........120.........130.........140.........150.........160.........170.........180..
 
   185....190.........200.........210.........220... ......230. ........240.....
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Query Sequence  DLRVGRIDAILVDRLAALDLVKKTNDTLAVTGEAFSRQE. . SGVALRKG. . . . NEDLLKAVNDAIAE
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Template Sequence  ALASGTVDGFFSLFDSYILEDRGVGKIIWSTKTAPVDWKLXGGVWARNDFVKQNPEITQAIVTAYLK
Template Known Secondary structure  TSSSSTTTTSGGGS
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   183......190.........200.........210.........220.........230.........240.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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