Job Description P0AEM9 Confidence 98.27% Date Thu Jan 5 11:23:44 GMT 2012 Rank 37 Aligned Residues 214 % Identity 10% Template c3n5lA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:binding protein component of abc phosphonate transporter; PDBTitle: crystal structure of a binding protein component of abc phosphonate2 transporter (pa3383) from pseudomonas aeruginosa at 1.97 a resolution Resolution 1.97 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		E	R	G	T	L	L	V	G	L	E	G	T	Y	P	P	F	S	F	Q	G	D	D	G	K	L	T	G	F	E	V	E	F	A	Q	Q	L	A	K	H	L	G	V	E	A	S	L	K	P	T	K	.	W	D	G	M	L	A	S	L	D	S	K	R	I	D	V	V	I	N	Q	V	T	I	S	D	E	R	K	K	K
Query Conservation																																																				.
Alig confidence																	.	.	.	.	.	.	.																													.
Template Conservation																	.	.	.	.	.	.	.
Template Sequence		D	Q	P	V	I	N	F	G	I	I	S	T	E	S	S	.	.	.	.	.	.	.	Q	N	L	K	S	I	W	E	P	F	L	K	D	X	S	Q	Q	T	G	Y	Q	V	K	A	F	F	A	P	D	Y	A	G	I	I	Q	G	X	R	F	D	K	V	D	I	A	W	Y	G	N	K	A	A	X	E	A	V	D	R
Template Known Secondary structure													S	S			.	.	.	.	.	.	.																			S	S								S	S										T	T	S		S
Template Predicted Secondary structure																	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40								.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.							130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.					.	.	.	150	.	.	.	.	.	.						.	.	.	160	.	.	.	.	.	.	.	.	.	170							.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.																		.	.	.	.											.	.	.	.	.															.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.																		.	.	.	.											.	.	.	.	.															.	.	.	.	.	.
Query Sequence		Y	D	F	S	T	P	Y	T	I	S	G	I	.	.	.	.	.	.	Q	A	L	V	K	K	G	N	E	G	T	I	K	T	A	D	D	.	.	.	.	L	K	G	K	K	V	G	V	G	L	.	.	.	.	.	G	T	N	Y	E	E	W	L	R	Q	N	V	Q	G	.	.	.	.	.	.	V	D	V	R	T	Y
Query Conservation														.	.	.	.	.	.																		.	.	.	.											.	.	.	.	.															.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																		.	.	.	.											.	.	.	.	.															.	.	.	.	.	.
Template Conservation
Template Sequence		A	H	G	E	I	F	A	Q	T	V	A	A	S	G	A	P	G	Y	W	S	L	L	I	A	N	K	D	S	K	I	D	S	L	E	D	X	L	A	N	A	K	S	L	T	F	G	N	G	D	P	N	S	T	S	G	Y	L	V	P	G	Y	Y	V	F	A	K	N	N	V	D	P	V	K	A	F	K	R	T	L	N
Template Known Secondary structure		S											T	T			S										T	T		S			S							T	G	G	G								T	T		T	T	T	T							T	T	T	T	T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.				210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																																			.	.	.																							.
Query SS confidence																																			.	.	.																							.
Query Sequence		D	D	D	P	T	K	Y	Q	D	L	R	V	G	R	I	D	A	I	L	V	D	R	L	A	A	L	D	L	V	K	K	T	N	.	.	.	D	T	L	A	V	T	G	E	A	F	S	R	Q	E	S	G	V	A	L	R	K	G	.	N	E	D	L	L	K	A	V	N	D	A	I	A	E	M	Q	K	D	G	T	L
Query Conservation																																			.	.	.																							.
Alig confidence																																			.	.	.																							.
Template Conservation
Template Sequence		S	S	H	E	V	N	A	L	A	V	A	N	K	Q	V	D	V	A	T	F	N	T	E	G	X	E	R	L	E	L	T	Q	P	E	K	A	R	Q	L	K	V	I	W	K	S	P	L	I	P	G	D	P	L	V	W	R	N	N	L	S	D	E	Q	K	N	K	L	R	D	F	F	F	K	Y	G	A	N	A	E	Q
Template Known Secondary structure													T	T	S	S	S																					T	T																			T	T	S																		S
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		253	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	L	S	E	K	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	V	L	A	D	L
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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