Job Description P0AEM9 Confidence 100.00% Date Thu Jan 5 11:23:44 GMT 2012 Rank 2 Aligned Residues 241 % Identity 25% Template c3hv1A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:polar amino acid abc uptake transporter substrate PDBTitle: crystal structure of a polar amino acid abc uptake2 transporter substrate binding protein from streptococcus3 thermophilus Resolution 1.90 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	S	F	A	D	E	G	L	L	N	K	V	K	E	R	G	T	L	L	V	G	L	E	G	T	Y	P	P	F	S	F	Q	G	D	D	G	K	L	T	G	F	E	V	E	F	A	Q	Q	L	A	K	H	L	G	V	E	A	S	L	K	P	T	K	W	D	G	M	L	A	S	L	D	S	K	R	I	D	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	H	F	A	T	Q	K	D	Q	W	Q	T	Y	T	K	E	K	K	I	K	I	G	F	D	A	T	F	V	P	X	G	Y	E	E	K	D	G	S	Y	I	G	F	D	I	D	L	A	N	A	V	F	K	L	Y	G	I	D	V	E	W	Q	A	I	D	W	D	X	K	E	T	E	L	K	N	G	T	I	D	L	I
Template Known Secondary structure			T	T	G	G	G	S										T								T			T	T	T					T	T	S																T	T	T										G	G	G								T	S		S
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.						.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.
Query Sequence		I	N	Q	V	T	I	S	D	E	R	K	K	K	Y	D	F	S	T	P	Y	T	I	S	G	I	Q	A	L	V	K	K	G	N	E	G	T	I	K	T	A	D	D	L	K	G	K	K	V	G	V	G	L	.	.	.	.	.	G	T	N	Y	E	E	W	L	R	Q	N	V	Q	G	V	D	V	R	T	Y	D	D	D
Query Conservation																																																						.	.	.	.	.
Alig confidence																																																						.	.	.	.	.
Template Conservation
Template Sequence		W	N	G	Y	S	V	T	D	E	R	K	Q	S	A	D	F	T	E	P	Y	X	V	N	E	Q	V	L	V	T	K	K	S	S	G	I	D	S	V	A	G	X	A	G	K	T	L	G	A	Q	A	G	S	S	G	Y	D	A	F	N	A	S	P	K	I	L	K	D	V	V	A	N	Q	K	V	V	Q	Y	S	T	F
Template Known Secondary structure			S	S		B							T	T																		G	G	G				S	S	G	G	G	T	T							T	T											T	T	T	T	T	T	T	S	G	G	G						S	S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		P	T	K	Y	Q	D	L	R	V	G	R	I	D	A	I	L	V	D	R	L	A	A	L	D	L	V	K	K	T	N	D	T	.	.	L	A	V	T	G	E	A	F	S	R	Q	E	S	G	V	A	L	R	K	G	N	E	D	L	L	K	A	V	N	D	A	I	A	E	M	Q	K	D	G	T	L	Q	A	L	S	E
Query Conservation																																		.	.
Alig confidence																																		.	.
Template Conservation
Template Sequence		T	Q	A	L	I	D	L	N	S	G	R	I	D	G	L	L	I	D	R	V	Y	A	N	Y	Y	L	E	K	S	G	V	L	D	Q	Y	N	V	X	P	A	G	Y	E	G	E	S	F	A	V	G	A	R	K	V	D	K	T	L	I	K	K	I	N	Q	G	F	E	T	L	Y	K	N	G	E	F	Q	K	I	S	N
Template Known Secondary structure											T	S		S																T	T		G	G	G							S	S											T	T																			T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		258	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	W	F	G	A	D	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	W	F	G	E	D	V	A
Template Known Secondary structure					S	S
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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