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Job DescriptionP0AEM9
Confidence39.85%DateThu Jan 5 11:23:44 GMT 2012
Rank83Aligned Residues196
% Identity10%Templatec3hhfB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:transcriptional regulator, lysr family; PDBTitle: structure of crga regulatory domain, a lysr-type transcriptional2 regulator from neisseria meningitidis.
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60.........70........ .80.........90.........100.........110........
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Query Sequence  RGTLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQLAKHL. GVEASLKPTKWDGMLASLDSKRIDVVINQVTISDERKKKY
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Template Sequence  QGVLSVDSAXPXV. . . . . . . . . . . LHLLAPLAAKFNERYPHIRLSLVSSEGYINLIERKVDIALRAGDDSGLRARHLFDS
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   92.......100.... .....110.........120.........130.........140.........150.........160
 
   119120.........130.........140.........150.........160.........170.........180.........190........
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Query Sequence  DFSTPYTISGIQALVKKGNEGTIKTADDLKGKKVGVGLGTNYEEWLRQNVQGVDVRTYDDDPTKYQDLRVGRIDAILVDR
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Template Sequence  RFRVIASPEYLAKHGTPQSTEELAGHQCLGFTEPGSLNTWAVLDAQGNPYKISPHFTASSGEILRSLCLSGCGIVCLSDF
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SSGGGGGGS
B
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GGGG
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SSSSTTS
B
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   199200.........210.........220.........230. ........240......
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Query Sequence  LAALDLVKKTNDTLAVTGEAFSRQESGVALRKG. . . NEDLLKAVNDAIAEM
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Template Sequence  LVDNDIAEGKLIPLLAEQTSDKTHPFNAVYYSDKAVNLRLRVFLDFLVEEL
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TTTB



GGGGG

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   243......250.........260.........270.........280.........290...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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