Job Description P0AEM9 Confidence 100.00% Date Thu Jan 5 11:23:44 GMT 2012 Rank 16 Aligned Residues 222 % Identity 21% Template c3delC_ PDB info PDB header:protein binding, transport protein Chain: C: PDB Molecule:arginine binding protein; PDBTitle: the structure of ct381, the arginine binding protein from the2 periplasm chlamydia trachomatis Resolution 1.92 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	L	L	V	G	L	E	G	T	Y	P	P	F	S	F	Q	G	D	D	G	K	L	T	G	F	E	V	E	F	A	Q	Q	L	A	K	H	L	G	V	E	A	S	L	K	P	T	K	W	D	G	M	L	A	S	L	D	S	K	R	I	D	V	V	I	N	Q	V	T	I	S	D	E	R	K	K	K	Y	D	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	F	I	V	G	T	N	A	T	Y	P	P	F	E	F	V	D	K	R	G	E	V	V	G	F	D	I	D	L	A	R	E	I	S	N	K	L	G	K	T	L	D	V	R	E	F	S	F	D	A	L	I	L	N	L	K	Q	H	R	I	D	A	V	I	T	G	M	S	I	T	P	S	R	L	K	E	I	L	M
Template Known Secondary structure										S		B	T	T	T	B				T	T	S				S														T										G	G	G							T	T	S	S	S				S	S	B	B							T	T	S
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	P	Y	T	I	S	G	I	Q	A	L	V	K	K	G	N	E	G	T	I	K	T	A	D	D	L	K	G	K	K	V	G	V	G	L	G	T	N	Y	E	E	W	L	R	Q	N	V	Q	G	V	D	V	R	T	Y	D	D	D	P	T	K	Y	Q	D	L	R	V	G	R	I	D	A	I	L	V	D	R	L	A
Query Conservation
Alig confidence																												.	.
Template Conservation																												.	.
Template Sequence		I	P	Y	Y	G	E	E	I	K	H	L	V	L	V	F	K	G	E	N	K	H	P	L	P	L	T	.	.	Q	Y	R	S	V	A	V	Q	T	G	T	Y	Q	E	A	Y	L	Q	S	L	S	E	V	H	I	R	S	F	D	S	T	L	E	V	L	M	E	V	M	H	G	K	S	P	V	A	V	L	E	P	S	I
Template Known Secondary structure										S								S			S					G	G	.	.	G	S	S						T	T	S									S	T	T							S	S										T	T	S	S	S
Template Predicted Secondary structure																												.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		201	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		A	L	D	L	V	K	K	T	N	D	.	.	.	T	L	A	V	T	G	E	A	F	S	R	Q	E	S	G	V	A	L	R	K	G	N	E	D	L	L	K	A	V	N	D	A	I	A	E	M	Q	K	D	G	T	L	Q	A	L	S	E	K	W	F	G	A	D	V
Query Conservation												.	.	.
Alig confidence												.	.	.
Template Conservation
Template Sequence		A	Q	V	V	L	K	D	F	P	A	L	S	T	A	T	I	D	L	P	E	D	Q	W	V	L	G	Y	G	I	G	V	A	S	D	R	P	A	L	A	L	K	I	E	A	A	V	Q	E	I	R	K	E	G	V	L	A	E	L	E	Q	K	W	G	L	N	N	L
Template Known Secondary structure						G	G	G		T	T										G	G	G											T	T																		T	T										T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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