Job Description P0AEM9 Confidence 100.00% Date Thu Jan 5 11:23:44 GMT 2012 Rank 17 Aligned Residues 228 % Identity 28% Template c2yjpB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:putative abc transporter, periplasmic binding protein, PDBTitle: crystal structure of the solute receptors for l-cysteine of2 neisseria gonorrhoeae Resolution 2.26 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.				80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		G	L	L	N	K	V	K	E	R	G	T	L	L	V	G	L	E	G	T	Y	P	P	F	S	F	Q	G	D	D	G	K	L	T	G	F	E	V	E	F	A	Q	Q	L	A	K	H	L	G	.	.	.	V	E	A	S	L	K	P	T	K	W	D	G	M	L	A	S	L	D	S	K	R	I	D	V	V	I	N	Q	V
Query Conservation																																																		.	.	.
Alig confidence																																																		.	.	.
Template Conservation
Template Sequence		A	T	V	A	A	I	K	E	K	G	V	I	R	I	G	V	F	G	D	K	P	P	F	G	Y	V	D	A	N	G	K	N	Q	G	F	D	V	E	I	A	K	D	L	A	K	D	L	L	G	S	P	D	K	V	E	F	V	L	T	E	A	A	N	R	V	E	Y	V	R	S	G	K	V	D	L	I	L	A	N	F
Template Known Secondary structure											T								S			T	T	T					T	T	S				S															S	S	G	G	G								G	G	G							T	T	S		S				S	S
Template Predicted Secondary structure
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	S	D	E	R	K	K	K	Y	D	F	S	T	P	Y	T	I	S	G	I	Q	A	L	V	K	K	G	N	E	G	T	I	K	T	A	D	D	L	K	G	K	K	V	G	V	G	L	G	T	N	Y	E	E	W	L	R	Q	N	V	Q	G	V	D	V	R	T	Y	D	D	D	P	T	K	Y	Q	D	L	R	V
Query Conservation
Alig confidence																											.	.
Template Conservation																											.	.
Template Sequence		T	Q	T	P	E	R	A	E	A	V	D	F	A	D	P	Y	M	K	V	A	L	G	V	V	S	.	.	P	K	N	K	P	I	T	D	M	A	Q	L	K	D	Q	T	L	L	V	N	K	G	T	T	A	D	A	F	F	T	K	S	H	P	E	V	K	L	L	K	F	D	Q	N	T	E	T	F	D	A	L	K	D
Template Known Secondary structure		B			T	T	G	G	G	T					S												.	.		T	T	S				S	G	G	G	T	T	T	S						T	T	S											T	T	S						S	S										T
Template Predicted Secondary structure																											.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	I	D	A	I	L	V	D	R	L	A	A	L	D	L	V	K	K	T	N	D	T	L	A	V	T	G	E	A	F	S	R	Q	E	S	G	V	A	L	R	K	G	N	E	D	L	L	K	A	V	N	D	A	I	A	E	M	Q	K	D	G	T	L	Q	A	L	S	E	K	W	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	G	V	A	L	A	H	D	N	A	L	L	W	A	W	A	K	E	N	P	N	F	E	V	A	I	G	N	L	G	P	A	E	F	I	A	P	A	V	Q	K	G	N	A	D	L	L	N	W	V	N	G	E	I	A	A	M	K	K	D	G	R	L	K	A	A	Y	E	K	T	L	L
Template Known Secondary structure		T	S	S	S																	T	T								S	S	S										T	T																			S										T
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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