Job Description P0AEM9 Confidence 97.66% Date Thu Jan 5 11:23:44 GMT 2012 Rank 40 Aligned Residues 213 % Identity 18% Template c2x26A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:periplasmic aliphatic sulphonates-binding protein; PDBTitle: crystal structure of the periplasmic aliphatic sulphonate2 binding protein ssua from escherichia coli Resolution 1.75 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																									.	.											.
Query SS confidence																																									.	.											.
Query Sequence		E	R	G	T	L	L	V	G	L	E	G	T	Y	P	P	F	S	F	Q	G	D	D	G	K	L	T	G	F	E	V	E	F	A	Q	Q	L	A	K	H	.	.	L	G	V	E	A	S	L	K	P	T	.	K	W	D	G	M	L	A	S	L	D	S	K	R	I	D	V	V	I	N	Q	V	T	I	S	D	E	R	K
Query Conservation																																									.	.											.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.													.	.											.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	P	E	A	L	R	I	G	Y	Q	K	G	S	I	G	.	.	.	.	.	.	.	.	.	.	.	.	M	V	L	A	K	S	H	Q	L	L	E	K	R	Y	P	E	S	K	I	S	W	V	E	F	P	A	G	P	Q	M	L	E	A	L	N	V	G	S	I	D	L	G	S	T	G	D	I	P	P	I	F	A	Q
Template Known Secondary structure				S								T	T				.	.	.	.	.	.	.	.	.	.	.	.							T	T							T	T	S								S	S											T	S		S						S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.													40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		116	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.							.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure											.	.	.																																																.	.	.	.	.	.
Query SS confidence											.	.	.																																																.	.	.	.	.	.
Query Sequence		K	K	Y	D	F	S	T	P	Y	.	.	.	T	I	S	G	I	Q	A	L	V	K	K	G	N	E	G	T	I	K	T	A	D	D	L	K	G	K	K	V	G	V	G	L	G	T	N	Y	E	E	W	L	R	Q	N	V	Q	G	V	.	.	.	.	.	.	D	V	R	T	Y	D	D	D	P	T	K	Y	Q	D	L
Query Conservation											.	.	.																																																.	.	.	.	.	.
Alig confidence											.	.	.																																																.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	G	A	D	L	V	Y	V	G	V	E	P	P	K	P	K	A	E	V	I	L	V	A	E	N	S	P	I	K	T	V	A	D	L	K	G	H	K	V	A	F	Q	K	G	S	S	S	H	N	L	L	L	R	A	L	R	Q	A	G	L	K	F	T	D	I	Q	P	T	Y	L	T	P	A	D	A	R	A	A	F
Template Known Secondary structure			T	T													G	G	G							T	T		S			S	G	G	G	G	T	T	S						T	T	S													T	T			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.					.	.	.					.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.				.	.	.	.																		.
Query SS confidence																																															.	.	.	.				.	.	.	.																		.
Query Sequence		R	V	G	R	I	D	A	I	L	V	D	R	L	A	A	L	D	L	V	K	K	T	N	D	T	L	A	V	T	G	E	A	F	S	R	Q	E	S	G	V	A	L	R	K	G	.	.	.	.	N	E	D	.	.	.	.	L	L	K	A	V	N	D	A	I	A	E	M	Q	K	D	G	T	.	L	Q	A	L	S	E
Query Conservation																																															.	.	.	.				.	.	.	.																		.
Alig confidence																																															.	.	.	.				.	.	.	.																		.
Template Conservation
Template Sequence		Q	Q	G	N	V	D	A	W	A	I	W	D	P	Y	Y	S	A	A	L	L	Q	G	G	V	R	V	L	K	D	G	T	D	L	N	Q	T	G	S	F	Y	L	A	A	R	P	Y	A	E	K	N	G	A	F	I	Q	G	V	L	A	T	F	S	E	A	D	A	L	T	R	S	Q	R	E	Q	S	I	A	L	L	A
Template Known Secondary structure			T	T	S	S	S						T	T									S	S							S	T	T	S																	T																					T
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		258	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	W	F	G	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	M	G	L	P
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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