Job Description P0AEM9 Confidence 100.00% Date Thu Jan 5 11:23:44 GMT 2012 Rank 4 Aligned Residues 230 % Identity 32% Template c2ieeB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:probable abc transporter extracellular-binding PDBTitle: crystal structure of yckb_bacsu from bacillus subtilis.2 northeast structural genomics consortium target sr574. Resolution 2.20 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	V	K	E	R	G	T	L	L	V	G	L	E	G	T	Y	P	P	F	S	F	Q	G	D	D	G	K	L	T	G	F	E	V	E	F	A	Q	Q	L	A	K	H	L	G	V	E	A	S	L	K	P	T	K	W	D	G	M	L	A	S	L	D	S	K	R	I	D	V	V	I	N	Q	V	T	I	S	D	E	R
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		E	Q	I	K	D	K	G	K	I	V	V	A	T	S	G	T	L	Y	P	T	S	Y	H	D	.	T	D	K	L	T	G	Y	E	V	E	V	V	R	E	A	A	K	R	L	G	L	K	V	E	F	K	E	X	G	I	D	G	X	L	T	A	V	N	S	G	Q	V	D	A	A	A	N	D	I	D	V	T	K	D	R
Template Known Secondary structure								T								S		B	T	T	T	B				.						S												T	T	T										S	T	T							T	T	S	S	S				S	S		B
Template Predicted Secondary structure																										.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	K	Y	D	F	S	T	P	Y	T	I	S	G	I	Q	A	L	V	K	K	G	N	E	G	T	I	K	T	A	D	D	L	K	G	K	K	V	G	V	G	L	G	T	N	Y	E	E	W	L	R	Q	N	V	Q	G	V	D	V	R	T	Y	D	D	D	P	T	K	Y	Q	D	L	R	V	G	R	I	D	A	I
Query Conservation
Alig confidence																																														.
Template Conservation																																														.
Template Sequence		E	E	K	F	A	F	S	T	P	Y	K	Y	S	Y	G	T	A	I	V	R	K	D	D	L	S	G	I	K	T	L	K	D	L	K	G	K	K	A	A	G	A	T	T	V	.	Y	X	E	V	A	R	K	Y	G	A	K	E	V	I	Y	D	N	A	T	N	E	Q	Y	L	K	D	V	A	N	G	R	T	D	V	I
Template Known Secondary structure			T	T							S											T	T	T	G	G	G		S	S	G	G	G	G	T	T								S		.								T	T							S	S												T	T	S
Template Predicted Secondary structure																																														.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.
Predicted Secondary structure																	.	.																																																						.
Query SS confidence																	.	.																																																						.
Query Sequence		L	V	D	R	L	A	A	L	D	L	V	K	K	T	N	.	.	D	T	L	A	V	T	G	E	A	F	S	R	Q	E	S	G	V	A	L	R	K	G	N	E	D	L	L	K	A	V	N	D	A	I	A	E	M	Q	K	D	G	T	L	Q	A	L	S	E	K	W	F	G	A	.	D	V	T	K
Query Conservation																	.	.																																																						.
Alig confidence																	.	.																																																						.
Template Conservation
Template Sequence		L	N	D	Y	Y	L	Q	T	L	A	L	A	A	F	P	D	L	N	I	T	I	H	P	D	I	K	Y	X	P	N	K	Q	A	L	V	X	K	K	S	N	A	A	L	Q	K	K	X	N	E	A	L	K	E	X	S	K	D	G	S	L	T	K	L	S	K	Q	F	F	N	K	A	D	V	S	K
Template Known Secondary structure																T	T	S	S					S	S														T	T																		T	T										T	T	T			T	T	S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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